ID A0A397SX45_9GLOM Unreviewed; 2508 AA.
AC A0A397SX45;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=PHD-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=C1645_823641 {ECO:0000313|EMBL:RIA90232.1};
OS Glomus cerebriforme.
OC Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota; Glomeromycotina;
OC Glomeromycetes; Glomerales; Glomeraceae; Glomus.
OX NCBI_TaxID=658196 {ECO:0000313|EMBL:RIA90232.1, ECO:0000313|Proteomes:UP000265703};
RN [1] {ECO:0000313|EMBL:RIA90232.1, ECO:0000313|Proteomes:UP000265703}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DAOM 227022 {ECO:0000313|EMBL:RIA90232.1,
RC ECO:0000313|Proteomes:UP000265703};
RA Morin E., San Clemente H., Chen E.C.H., De La Providencia I., Hainaut M.,
RA Kuo A., Kohler A., Murat C., Tang N., Roy S., Loubradou J., Henrissat B.,
RA Grigoriev I.V., Corradi N., Roux C., Martin F.M.;
RT "Comparative genomics reveals the genomic features of Rhizophagus
RT irregularis, R. cerebriforme, R. diaphanum and Gigaspora rosea, and their
RT symbiotic lifestyle signature.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RIA90232.1}.
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DR EMBL; QKYT01000187; RIA90232.1; -; Genomic_DNA.
DR STRING; 658196.A0A397SX45; -.
DR Proteomes; UP000265703; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd02440; AdoMet_MTases; 1.
DR CDD; cd15571; ePHD; 1.
DR CDD; cd20104; MBT_PHF20L1-like; 4.
DR Gene3D; 2.30.30.140; -; 4.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR004092; Mbt.
DR InterPro; IPR043449; PHF20-like.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR InterPro; IPR002999; Tudor.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15856:SF51; MBD-R2; 1.
DR PANTHER; PTHR15856; PHD FINGER PROTEIN 20-RELATED; 1.
DR Pfam; PF02820; MBT; 1.
DR Pfam; PF13771; zf-HC5HC2H; 1.
DR SMART; SM00561; MBT; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00333; TUDOR; 3.
DR SUPFAM; SSF54160; Chromo domain-like; 2.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
DR SUPFAM; SSF63748; Tudor/PWWP/MBT; 2.
DR PROSITE; PS51805; EPHD; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000265703};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00094}.
FT DOMAIN 1648..1767
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT DOMAIN 1871..1901
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT REGION 853..924
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1028..1108
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1329..1361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1476..1501
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 2298..2327
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 864..878
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 879..901
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1035..1052
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1064..1108
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1337..1361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 2308..2327
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2508 AA; 288577 MW; B4D96BB6CB8A929D CRC64;
MYLPYENFEQ NVKATSTSNW QLNATETPPG VNPHHLLPPP PQSYFPQRPI ISTFNNAHQI
NPPPYFRPQN QSYEKFKKNK RGFIRHNDFT NNQYVYTPDQ NFKNNNYSAS PRFNSTVNSG
QHQIWHAPNN NNNYPNWPIA NSTECQYAPK HFDRQNRQIF PPGTQPYPIH HFSQQYSHHL
VPNSPRPQRP NNYQFFASQQ PVQHLYQHGS QPNDFHQAII PQFPTPSLDN NNENVENFEN
ITQTKKNKKN KKKKIIEFSK NNNQIVPSSS EFIKQNDTES KKRIRPSDNV KSSIIPLSNE
SLTKSFHTYE NDGRKLFTKK KIVNKIEINL KERASKDRIS RLNCSSSKSF LPDDENHEVF
GIKKKIKLDM EIDSIPSVQD SISTENTQIP SHDNAEILSS SISIISEVIS DSYNSAIDPS
ESLIFDDSIS QNENSTRRDS GVACDNMELD DMVIKEKDIN DPPITISNAI LENSNYNSNS
IINNSETIND IVVSNVLSSN VNEKMIMESD LSKFTKLIPD SSLNNNLLNP NNEFKENSLV
LEISTTSILS PIIRNESTNI INIVSNSDNE NCLMLIDNEI QREKDEKTNY QSKLSYNLDI
PIVNETSKDL VTTSNVIQDE LAIPIDKKVG DDLKEDFPIE NLPDNAFEVT NNSDDIKSPE
DSFIIVDDLP EFEDSDIKLT GNENPDVDST SELTNSFSNM DFSYTCRNKQ RFAKLIEESI
EEIREDNESP NRSSKSSTTN EKDKFVGTIF TRRGIKDLSF AKFEGYSINQ RVKVLNVDSI
WYPGTIIAMD KTKVRVRFDG WDAKYDEWVS KDSRRLRVMS DEEILEIQNS SQNDYEVIKQ
HFIFDNKIEK QETMSTTTDT EDPQTDPLKS ENTKKKTTKK QTNLNNNTKK VRGSPKVQSL
QAKKSIDRKQ KKNNSRSKSP TNVCKKQCNS CESTSDKLEK VGALELCTKC VPLFAPQLTR
VKAFAHEFTL DQKVQVLNID KIWYPARIIK VEKSKVKVHF DGWGKRFDEW ISVESRRLKT
LSENEVNQIQ KENNLSDDSD SKQDKFNQDH NQTKDSTSEC PPKSINDKPK KECQPKSIDD
KPKKECPPKS FNLNDKPKKD SICSRDNDKE RQLNTYKLKE ILGSDSESLS SVPDSDSDSL
SSCSESILSS SSSLSVSESN FNSLSSSSDD EFVKMPKIKR TIRRNKKAPI RKKSLQSSKE
KICESCKIMH LNVQRVGSLD LCTYCRSLFG DDTTFRFKRG GQYGFELHKR VKVLSRDGEW
YPATMIDVDD GRIRVHFDGW SDYFDEWIPA GSQRMRDMTL EETLEAQKAL EQLDKETLEQ
REIIYKPQKR RRSNLKRTIQ SSSVVTPSNV ASKSTDSTET ANNKACVDLG LPGQQSDHST
DSIISFDWNE YYFGRDTRRS LRNDKLLSNS DVLAKLKSRF KPGNQIEVRD RLKEWVPATI
IETKGCRVLI HYDDVPAFYD EWIDISSERL REKCTKNEAN ETAQNAKSTS TSLESKKDLK
KKKDKAENDD YRLEFVVNGA LNGRLITADD KWCIYCNQCN VVIKQFRYYC TYCESPSEGN
DYKSFELCVW CFAHQFPNYH EHPRCSFAVQ SVIDDEAIKM SSKGEVVKTF DRDVFDTTYK
EPKLDLMGNE VPLETDMGYL YLQAWNMRKI CGFCNDDDPN QLGGFIAPYP FVSNTYTRHG
EKQKTFWSHH ACAKYSPEVF VTKSNEWYNV TLAWKRGRSM KCGKCKERGA TIGCFEPKCA
KSYHLSCTDK PLSHFEMGVI FYCPTHEARY LQKELYNEVY RCDVCSCELQ EDKWKTCRPC
ESNFFSSFDL CLQCFEEKFP EHEHNKDEFE ETSVKKIKDA QITKQATLAV ANQKARSAGM
RKKSKNSQQN KGGRIQCSYC WAEESSRWRK GYNGVLMCED CFELVLVNNN TGESQEKDKL
LVTSEDYSYQ PYLTRNFCSD KKFDDFESQA MYLDSYEPVE NQLFSLSFDS SYFDIPGRAP
RWATHSGTDY HGTWLPQTVR RALLRFTNKN GKVLSNFLGR GTDAIESFLL GRRLVGIDIN
PAAVALSQRN CSFSIPPNRG ITAEHRPIIL QADSRNLSGP MFEDESFDHI LSHPPYKNCV
EYSTHIDGDL SRFANSKEFA IEMSKVIDES WRLLKPGRRV TLGIGDNREH CFYVPVSFNL
FRQYIDQGFE LEELVAKRQR YCQAFGLGTY LCVQYDFLMF THEFIATFKK VDKAHNDRML
VTPDESTLSG TVTFSRNLRE IPVLPIARKS VVMGTTWTFK PTSTHSFVQL CTSRMVERFG
RDFANWEEIQ IKFNNMEANN TANDNSSHKL TKSEDQTDSE EENMPEYERI RQKRIKENQK
MLLSLGLKCD LGETSDDISH LEKILHSMPL PPPVPTALIV VPHIPNNILT SQIIPIYRTA
IKHLAKEAYE RLPPSGFFVI GGQDVRTSDN KLWPLSMLFM EDVNNSVGED KMPLKELVVT
VPEGYAKDKK KITKKEDYIE EHCILDEDDK IEHLPIVHAC YLIFMKLR
//
