ID A0A397Y740_BRACM Unreviewed; 983 AA.
AC A0A397Y740;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=DDT domain-containing protein {ECO:0000259|PROSITE:PS50827};
GN ORFNames=BRARA_H00212 {ECO:0000313|EMBL:RID49411.1};
OS Brassica campestris (Field mustard).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3711 {ECO:0000313|EMBL:RID49411.1, ECO:0000313|Proteomes:UP000264353};
RN [1] {ECO:0000313|EMBL:RID49411.1, ECO:0000313|Proteomes:UP000264353}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B-3 {ECO:0000313|Proteomes:UP000264353};
RA Bowman J., Kohchi T., Yamato K., Jenkins J., Shu S., Ishizaki K.,
RA Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S.,
RA Althoff F., Araki T., Arteaga-Vazquez M., Balasubrmanian S., Bauer D.,
RA Boehm C., Briginshaw L., Caballero-Perez J., Catarino B., Chen F.,
RA Chiyoda S., Chovatia M., Davies K., Delmans M., Demura T., Dierschke T.,
RA Dolan L., Dorantes-Acosta A., Eklund D., Florent S., Flores-Sandoval E.,
RA Fujiyama A., Fukuzawa H., Galik B., Grimanelli D., Grimwood J.,
RA Grossniklaus U., Hamada T., Haseloff J., Hetherington A., Higo A.,
RA Hirakawa Y., Hundley H., Ikeda Y., Inoue K., Inoue S., Ishida S., Jia Q.,
RA Kakita M., Kanazawa T., Kawai Y., Kawashima T., Kennedy M., Kinose K.,
RA Kinoshita T., Kohara Y., Koide E., Komatsu K., Kopischke S., Kubo M.,
RA Kyozuka J., Lagercrantz U., Lin S., Lindquist E., Lipzen A., Lu C.,
RA Luna E., Martienssen R., Minamino N., Mizutani M., Mizutani M.,
RA Mochizuki N., Monte I., Mosher R., Nagasaki H., Nakagami H., Naramoto S.,
RA Nishitani K., Ohtani M., Okamoto T., Okumura M., Phillips J., Pollak B.,
RA Reinders A., Roevekamp M., Sano R., Sawa S., Schmid M., Shirakawa M.,
RA Solano R., Spunde A., Suetsugu N., Sugano S., Sugiyama A., Sun R.,
RA Suzuki Y., Takenaka M., Takezawa D., Tomogane H., Tsuzuki M., Ueda T.,
RA Umeda M., Ward J., Watanabe Y., Yazaki K., Yokoyama R., Yoshitake Y.,
RA Yotsui I., Zachgo S., Schmutz J.;
RT "WGS assembly of Brassica rapa FPsc.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM010635; RID49411.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A397Y740; -.
DR Proteomes; UP000264353; Chromosome a8.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR InterPro; IPR007759; Asxl_HARE-HTH.
DR InterPro; IPR018501; DDT_dom.
DR InterPro; IPR044977; RLT1-3.
DR InterPro; IPR028942; WHIM1_dom.
DR InterPro; IPR028941; WHIM2_dom.
DR PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR PANTHER; PTHR36968:SF8; HOMEOBOX-DDT DOMAIN PROTEIN RLT3 ISOFORM X1; 1.
DR Pfam; PF02791; DDT; 1.
DR Pfam; PF05066; HARE-HTH; 1.
DR Pfam; PF15612; WHIM1; 1.
DR Pfam; PF15613; WSD; 1.
DR SMART; SM00571; DDT; 1.
DR PROSITE; PS50827; DDT; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 251..310
FT /note="DDT"
FT /evidence="ECO:0000259|PROSITE:PS50827"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 60..89
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 141..162
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 470..492
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 75..89
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 476..490
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 983 AA; 111077 MW; A98A0FD9545766A2 CRC64;
MNAEKMDERR RTSRKKSSVA AAVRAKIPRS ALRKINCQKL LTSQYILAKV FRKDGPSLGF
QFDHLPPSSS SVDQQRVGRK RKVSEQHTSQ DDCVVVKKKQ YGIGKGLMTA WRVMNPNSHE
RATLAQSNPK KTKTQLASIL KQKQKKKSTE KKRTSINTET TEELNKDETV GFSEKCELGE
VFKETCQTMS ILVDDEELER QEGLVNPPLT CSCHTATCGS CFLCKDLLPK FPPSSVGMRL
PFALHPWNSS PESVKKLFKV VHFLYTYSVT LDICPFTIDE FTRAFHDKDS LLLGKIHLSL
LKLLLVDVET ELQRGSFSTL SISCKFLALL QSVESQIRIL DMWKDSLNSL TWAEILRQIL
VAAGFGSVKR AAGQSEELSK ERRLMKKYGL RLGTLKGELF RMLNEQGGKN GLKISELANA
AVEVAALNLA TASEEERECS ICSTLASDIT LFEKISESTY RARVSCFSED HESDSGESGS
VDDDEESGDE MGRVSESFVF RKAKRRKHRS KMLEVCSEID ESHPGEAWLL GLMEGEYSDL
SIEEKLDVFI ALIDLLSSGS TIRMEDLPRA MVDCVPSIYS HGSGGKIKRA SSSNHPRVSW
VHGGERIEKL SKSSDSHPVD SSSIVGADFA KLAGDNVHPM QSVYLGSDRR FNRYWLFLGP
CNANDPGHRC VYFESSEDGH WEVISHKEAL RALLSVLDDR GRREARLIES LEKRESFLCQ
AMLRRIDHVV REDSSSSPVS DIDNNNLCLN EIANDQQAAI VFEKRGNSLL WSLVQEFDEW
IWDKYYLNLN AVKHSRRSYL DSLTRCKSCH DLYWRDEKHC KICHATFELD IDLEERYAIH
EATCSRKNEE TSDSFPDHKV LSSQLQSLKA AVYAIESAMP EDALIGAWKK SAHRLWAKRL
RRSSTLSEIT QVIGDFVGAI NEDWLWHFGE EDGEIITSFP SMPRTTSAIA LWLVKLDTLI
ASYVVEKAPQ PEGNQLNRTR KHK
//
