ID A0A397Z0G9_BRACM Unreviewed; 1014 AA.
AC A0A397Z0G9;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=oxoglutarate dehydrogenase (succinyl-transferring) {ECO:0000256|ARBA:ARBA00012280};
DE EC=1.2.4.2 {ECO:0000256|ARBA:ARBA00012280};
GN ORFNames=BRARA_F02446 {ECO:0000313|EMBL:RID59202.1};
OS Brassica campestris (Field mustard).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3711 {ECO:0000313|EMBL:RID59202.1, ECO:0000313|Proteomes:UP000264353};
RN [1] {ECO:0000313|EMBL:RID59202.1, ECO:0000313|Proteomes:UP000264353}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B-3 {ECO:0000313|Proteomes:UP000264353};
RA Bowman J., Kohchi T., Yamato K., Jenkins J., Shu S., Ishizaki K.,
RA Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S.,
RA Althoff F., Araki T., Arteaga-Vazquez M., Balasubrmanian S., Bauer D.,
RA Boehm C., Briginshaw L., Caballero-Perez J., Catarino B., Chen F.,
RA Chiyoda S., Chovatia M., Davies K., Delmans M., Demura T., Dierschke T.,
RA Dolan L., Dorantes-Acosta A., Eklund D., Florent S., Flores-Sandoval E.,
RA Fujiyama A., Fukuzawa H., Galik B., Grimanelli D., Grimwood J.,
RA Grossniklaus U., Hamada T., Haseloff J., Hetherington A., Higo A.,
RA Hirakawa Y., Hundley H., Ikeda Y., Inoue K., Inoue S., Ishida S., Jia Q.,
RA Kakita M., Kanazawa T., Kawai Y., Kawashima T., Kennedy M., Kinose K.,
RA Kinoshita T., Kohara Y., Koide E., Komatsu K., Kopischke S., Kubo M.,
RA Kyozuka J., Lagercrantz U., Lin S., Lindquist E., Lipzen A., Lu C.,
RA Luna E., Martienssen R., Minamino N., Mizutani M., Mizutani M.,
RA Mochizuki N., Monte I., Mosher R., Nagasaki H., Nakagami H., Naramoto S.,
RA Nishitani K., Ohtani M., Okamoto T., Okumura M., Phillips J., Pollak B.,
RA Reinders A., Roevekamp M., Sano R., Sawa S., Schmid M., Shirakawa M.,
RA Solano R., Spunde A., Suetsugu N., Sugano S., Sugiyama A., Sun R.,
RA Suzuki Y., Takenaka M., Takezawa D., Tomogane H., Tsuzuki M., Ueda T.,
RA Umeda M., Ward J., Watanabe Y., Yazaki K., Yokoyama R., Yoshitake Y.,
RA Yotsui I., Zachgo S., Schmutz J.;
RT "WGS assembly of Brassica rapa FPsc.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=thiamine diphosphate; Xref=ChEBI:CHEBI:58937;
CC Evidence={ECO:0000256|ARBA:ARBA00001964};
CC -!- SIMILARITY: Belongs to the alpha-ketoglutarate dehydrogenase family.
CC {ECO:0000256|ARBA:ARBA00006936}.
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DR EMBL; CM010633; RID59202.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A397Z0G9; -.
DR Proteomes; UP000264353; Chromosome a6.
DR GO; GO:0004591; F:oxoglutarate dehydrogenase (succinyl-transferring) activity; IEA:UniProtKB-EC.
DR GO; GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
DR GO; GO:0006099; P:tricarboxylic acid cycle; IEA:InterPro.
DR CDD; cd02016; TPP_E1_OGDC_like; 1.
DR Gene3D; 3.40.50.12470; -; 1.
DR Gene3D; 3.40.50.970; -; 1.
DR Gene3D; 3.40.50.11610; Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain; 1.
DR Gene3D; 1.10.287.1150; TPP helical domain; 1.
DR InterPro; IPR032106; 2-oxogl_dehyd_N.
DR InterPro; IPR011603; 2oxoglutarate_DH_E1.
DR InterPro; IPR001017; DH_E1.
DR InterPro; IPR031717; KGD_C.
DR InterPro; IPR042179; KGD_C_sf.
DR InterPro; IPR029061; THDP-binding.
DR InterPro; IPR005475; Transketolase-like_Pyr-bd.
DR NCBIfam; TIGR00239; 2oxo_dh_E1; 1.
DR PANTHER; PTHR23152; 2-OXOGLUTARATE DEHYDROGENASE; 1.
DR PANTHER; PTHR23152:SF30; OXOGLUTARATE DEHYDROGENASE (SUCCINYL-TRANSFERRING); 1.
DR Pfam; PF16078; 2-oxogl_dehyd_N; 1.
DR Pfam; PF00676; E1_dh; 1.
DR Pfam; PF16870; OxoGdeHyase_C; 1.
DR Pfam; PF02779; Transket_pyr; 1.
DR PIRSF; PIRSF000157; Oxoglu_dh_E1; 1.
DR SMART; SM00861; Transket_pyr; 1.
DR SUPFAM; SSF52518; Thiamin diphosphate-binding fold (THDP-binding); 2.
PE 3: Inferred from homology;
KW Oxidoreductase {ECO:0000256|ARBA:ARBA00023002};
KW Thiamine pyrophosphate {ECO:0000256|ARBA:ARBA00023052}.
FT DOMAIN 628..841
FT /note="Transketolase-like pyrimidine-binding"
FT /evidence="ECO:0000259|SMART:SM00861"
SQ SEQUENCE 1014 AA; 114966 MW; 1B63E3815228A350 CRC64;
MVWFRSGSSL AKLAIRRTLS QSRVLPSSHT RCFHSTSLKS NAAPVPRPVP LSKLTDSFLD
GTSSVYLEEL QRAWEADPNS VDESWDNFFR NFVGQAATSP GISGQTIQES MRLLLLVRAY
QVNGHMKAKL DPLGLEEREI PEDLTPGLYG FSEADLDREF FLGVWRMSGF LSENRPVQTL
RAILSRLEQA YCGTIGYEYM HIADRDKCNW LRDKIETPTP RQYNSERRVV IYDRLTWSTQ
FENFLATKWT TAKRFGLEGA ESLIPGMKEM FDRAADLGVE NIVIGMPHRG RLNVLGNVVR
KPLRQIFSEF SGGTRPVDEV GLYTGTGDVK YHLGTSYDRP TRGGKHLHLS LLANPSHLEA
VDPVVMGKTR AKQYYTKDES RTKNMGILIH GDGSFAGQGV VYETLHLSAL PNYCTGGTVH
IVVNNQVAFT TDPRAGRSSQ YCTDVAKALD APIFHVNADD IEAVVHVCEL AAEWRQTFHS
DVVVDLVCYR RFGHNEIDEP SFTQPKMYKV IRSHPSSLQI YQEKLVESGQ VTKEDIDKIQ
KKVSSILNEE FEASKEYIPQ KRDWLASHWT GFKSPEQISR IRNTGVKPEI LKNVGKAIST
FPENFKPHRG VKRVYEQRAQ MIESGEGIDW GLGEALAFAT LVVEGNHVRL SGQDVERGTF
SHRHSVLHDQ ETGKEYCPLD HLTMNQDPEM FTVSNSSLSE FGVLGFELGY SMENPNSLVI
WEAQFGDFAN GAQVMFDQFI SSGEAKWLRQ TGLVVLLPHG YDGQGPEHSS GRLERFLQMS
DDNPFVIPEM DPTLRKQIQE CNWQIVNVTT PANYFHVLRR QIHRDFRKPL IVMAPKNLLR
HKKCVSNLSE FDDVKGHPGF DKQGTRFKRL IKDQSGHSDL EEGIRRLVLC SGKVYYELDE
ERQKSGTNDI AICRMEQLCP FPYDLIQREL KRYPNAEIVW CQEEPMNMGA YQYIAPRLCT
AMKALNRGSF NDIKYVGRLP SAATATGFYQ LHVKEQTDLV HKALQPDPIT PILP
//