ID A0A398A027_BRACM Unreviewed; 1011 AA.
AC A0A398A027;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};
GN ORFNames=BRARA_C03088 {ECO:0000313|EMBL:RID71131.1};
OS Brassica campestris (Field mustard).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3711 {ECO:0000313|EMBL:RID71131.1, ECO:0000313|Proteomes:UP000264353};
RN [1] {ECO:0000313|EMBL:RID71131.1, ECO:0000313|Proteomes:UP000264353}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B-3 {ECO:0000313|Proteomes:UP000264353};
RA Bowman J., Kohchi T., Yamato K., Jenkins J., Shu S., Ishizaki K.,
RA Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S.,
RA Althoff F., Araki T., Arteaga-Vazquez M., Balasubrmanian S., Bauer D.,
RA Boehm C., Briginshaw L., Caballero-Perez J., Catarino B., Chen F.,
RA Chiyoda S., Chovatia M., Davies K., Delmans M., Demura T., Dierschke T.,
RA Dolan L., Dorantes-Acosta A., Eklund D., Florent S., Flores-Sandoval E.,
RA Fujiyama A., Fukuzawa H., Galik B., Grimanelli D., Grimwood J.,
RA Grossniklaus U., Hamada T., Haseloff J., Hetherington A., Higo A.,
RA Hirakawa Y., Hundley H., Ikeda Y., Inoue K., Inoue S., Ishida S., Jia Q.,
RA Kakita M., Kanazawa T., Kawai Y., Kawashima T., Kennedy M., Kinose K.,
RA Kinoshita T., Kohara Y., Koide E., Komatsu K., Kopischke S., Kubo M.,
RA Kyozuka J., Lagercrantz U., Lin S., Lindquist E., Lipzen A., Lu C.,
RA Luna E., Martienssen R., Minamino N., Mizutani M., Mizutani M.,
RA Mochizuki N., Monte I., Mosher R., Nagasaki H., Nakagami H., Naramoto S.,
RA Nishitani K., Ohtani M., Okamoto T., Okumura M., Phillips J., Pollak B.,
RA Reinders A., Roevekamp M., Sano R., Sawa S., Schmid M., Shirakawa M.,
RA Solano R., Spunde A., Suetsugu N., Sugano S., Sugiyama A., Sun R.,
RA Suzuki Y., Takenaka M., Takezawa D., Tomogane H., Tsuzuki M., Ueda T.,
RA Umeda M., Ward J., Watanabe Y., Yazaki K., Yokoyama R., Yoshitake Y.,
RA Yotsui I., Zachgo S., Schmutz J.;
RT "WGS assembly of Brassica rapa FPsc.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM010630; RID71131.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A398A027; -.
DR Proteomes; UP000264353; Chromosome a3.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0006952; P:defense response; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR011713; Leu-rich_rpt_3.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR PANTHER; PTHR11017:SF230; ADP-RIBOSYL CYCLASE_CYCLIC ADP-RIBOSE HYDROLASE; 1.
DR PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF07725; LRR_3; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF01582; TIR; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
FT DOMAIN 71..235
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
SQ SEQUENCE 1011 AA; 114565 MW; 0DF9560FF81A6887 CRC64;
MGSESDSIEE KAAARKEALR ALRAAQELSE SKEEGDGDDV AVVEEDFVIL FFLLLTVMMA
SSSSSSLARS WLYHVFLSFR GEDVRKTFLS HVLEKLENKG INVFIDNEIE RGESVGPELV
KAIRHSRVAV VLLSRNYASS SWCLDELVEI MKCREEFGQT VMTIFYQVDP SDVRKQTGDF
GKAFEKTCVG KTEEVKQAWR QALKDVAGIA GYHSSNCGNE ADLINKVASD VMVVLGFTPS
KDFDDFVGIE ARIMEIKSKL ILQSEEVKVI GIFGPAGIGK TTTARVLYKQ LSTDFQFSTF
LEDIRGSYKK PCGNDYQLKL HFQKNLLCQI LNRKNIEVHH LGGAQEMLGD KKVLLVLDEV
DNWWQLEEMA KQRRWVGPGS IIIITTEDRK LLKAFGLGID HIYKMKYPTS DESLQIFCQH
AFGQNYPDDG FESLAREVTW LAGDLPLGLR VMGSYLRAMS RDEWIEALPW LRLIASKDYG
FIYMHRLLEQ MGREIVKKQA MENPAAPKFL TDTKEISDVL DEDTATGNVV GIMLCTSQKI
QINKSAFQGM NNLQFLYFAP DTTTCTLEGL DCLPDKLILL HWPECPLRVW PSKFSGKFLV
ELIMPCSEFE LLWEGIKPLP CLKKLNLSSS QNLKKIPDLS KATSLEELCL QECVSLLELT
SSFRNATKLY RLDISGCKKI KDFPNVPDSI IELDLCKTGI KEVPPWIDNL FRLRKLIMNG
CKKLKTISPN ISKLENLEFL ALRNYGYCGV HNHEEKYDDG LYMYVNLFEA IIEWGPDFKR
RWRLQSDLEV DYILPICLPE KAFTSPISLR LRGYGIKTIP DCITRLSGLI KLEVGECREL
VEITPLPDSL LYLDAQGCES LKRIDSSSFQ NPEICMNFAY CINLKQKARK LIQTSACKYA
VLPGEEVPAH FTHRASSSSL TITSTPRPLT SSFRFKACIL LSTVYDHLGD TGDDDEKEGE
NSLTSMSYSV RAKQNGLTVG CGSNQLLMPA LYRPFRRIAP YRKRHKHRSK Q
//
