ID A0A398AVL7_BRACM Unreviewed; 1024 AA.
AC A0A398AVL7;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=DIRP domain-containing protein {ECO:0000259|SMART:SM01135};
GN ORFNames=BRARA_A03726 {ECO:0000313|EMBL:RID81124.1};
OS Brassica campestris (Field mustard).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3711 {ECO:0000313|EMBL:RID81124.1, ECO:0000313|Proteomes:UP000264353};
RN [1] {ECO:0000313|EMBL:RID81124.1, ECO:0000313|Proteomes:UP000264353}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B-3 {ECO:0000313|Proteomes:UP000264353};
RA Bowman J., Kohchi T., Yamato K., Jenkins J., Shu S., Ishizaki K.,
RA Yamaoka S., Nishihama R., Nakamura Y., Berger F., Adam C., Aki S.,
RA Althoff F., Araki T., Arteaga-Vazquez M., Balasubrmanian S., Bauer D.,
RA Boehm C., Briginshaw L., Caballero-Perez J., Catarino B., Chen F.,
RA Chiyoda S., Chovatia M., Davies K., Delmans M., Demura T., Dierschke T.,
RA Dolan L., Dorantes-Acosta A., Eklund D., Florent S., Flores-Sandoval E.,
RA Fujiyama A., Fukuzawa H., Galik B., Grimanelli D., Grimwood J.,
RA Grossniklaus U., Hamada T., Haseloff J., Hetherington A., Higo A.,
RA Hirakawa Y., Hundley H., Ikeda Y., Inoue K., Inoue S., Ishida S., Jia Q.,
RA Kakita M., Kanazawa T., Kawai Y., Kawashima T., Kennedy M., Kinose K.,
RA Kinoshita T., Kohara Y., Koide E., Komatsu K., Kopischke S., Kubo M.,
RA Kyozuka J., Lagercrantz U., Lin S., Lindquist E., Lipzen A., Lu C.,
RA Luna E., Martienssen R., Minamino N., Mizutani M., Mizutani M.,
RA Mochizuki N., Monte I., Mosher R., Nagasaki H., Nakagami H., Naramoto S.,
RA Nishitani K., Ohtani M., Okamoto T., Okumura M., Phillips J., Pollak B.,
RA Reinders A., Roevekamp M., Sano R., Sawa S., Schmid M., Shirakawa M.,
RA Solano R., Spunde A., Suetsugu N., Sugano S., Sugiyama A., Sun R.,
RA Suzuki Y., Takenaka M., Takezawa D., Tomogane H., Tsuzuki M., Ueda T.,
RA Umeda M., Ward J., Watanabe Y., Yazaki K., Yokoyama R., Yoshitake Y.,
RA Yotsui I., Zachgo S., Schmutz J.;
RT "WGS assembly of Brassica rapa FPsc.";
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM010628; RID81124.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A398AVL7; -.
DR Proteomes; UP000264353; Chromosome a1.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0017053; C:transcription repressor complex; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.20.58.1880; -; 1.
DR InterPro; IPR033471; DIRP.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR010561; LIN-9/ALY1.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR21689:SF6; DIRP DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR21689; LIN-9; 1.
DR Pfam; PF06584; DIRP; 1.
DR SMART; SM01135; DIRP; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242}.
FT DOMAIN 605..706
FT /note="DIRP"
FT /evidence="ECO:0000259|SMART:SM01135"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 114..345
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 366..572
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 913..954
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 20..40
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..157
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 195..222
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 237..256
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 257..298
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 373..389
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 427..447
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 450..467
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 468..488
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 508..529
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 530..546
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 551..572
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 932..951
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1024 AA; 114641 MW; F39E1F8753558659 CRC64;
MAPTVRKSRS VNKRFTNEQP SPKRSSRENK LRKKKLSDKL GPQWTKAELE RFYDSYRKYG
HDWRKVAAAI RNSRNVEMVE ALFNMNKAYL SLPEGTASVA GLIAMMTDHY SVMEGSGSEG
EGPDVSETPK KEKKRKRAKP QLSDSREEVD RDHPVASSTD GCLKFLKQAR GTHRRATGKR
TPRVPVQTSR DDGEGSTPPN KRARKQQRDA NDDVERYLEL ALAEASRRGG GSPKELSDNS
PIKNWGKMSR TRKAQSWVGS SREKKRESDM EEVGEMEVPR KGKRVYKKRV KVEEAEGDSS
DDNGGASSAT EGLGTKSKRR KAGREASRGT YSPRSPKNID NKLTSGDEFD ALQALAELSA
SFLPSALMES ESSPQVKEER IENDMDEKPS SPEATTSTSS HGEKANSEPD ESLLHAISAI
GNAVYNRKPK PSTQASTDCN AGKLQPEPTS ASLRRKRKPK KLGDESPPDS SQNKSINKKA
FAQENHNMKS YLRTKRAGQV PSQSKQLKTV KELEESTTIS DKKDVVVTTK QDSDSGPATS
PQKPPNRRKA SLKKSLQERA KSSETIHKVP RSSRSLSEQE LLLKDELSTY MSYPLARRRC
IFEWFYSAID HPWFAKMEFV DYLNHVGLGH VPRLTRLEWS VIKSSLGRAR RFSERFLQEE
REKLRQYRES VRKHYTELRT GAREGLPTDL ARPLAVGNRV IAIHPITREI HDGKILTVDH
NQCNVLFDDL GVELVKDIDC MPSNPLEYMP EGLRRQIDKC LSMKKEAQQN GNPNLGLSAI
FPPYGLENAD CSMSHSLNQG DMNAPILHGK VSTDTSIPHQ TNQSCIIDYS KGREAEIQRA
LALQHALDEK EMEPEMLEIV KVSKTRAKAM VDAAITAASS VKEGEDAIKM IQEALDMIGK
HQPLRSSIVV KQEENASGSI EHHHHNPSPS DASKPMADND SISQNGSEKK EAQMPSELIT
SCVATWIMIQ MCTERQYPPA YVAQLMDTAV TSLQPRCPQN LPIYREIQMC MGRIKTQIMS
LVPS
//
