ID A0A398BC93_9BACI Unreviewed; 472 AA.
AC A0A398BC93;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=PAS domain-containing protein {ECO:0000313|EMBL:RID85430.1};
GN ORFNames=D1953_11500 {ECO:0000313|EMBL:RID85430.1};
OS Peribacillus asahii.
OC Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Peribacillus.
OX NCBI_TaxID=228899 {ECO:0000313|EMBL:RID85430.1, ECO:0000313|Proteomes:UP000266016};
RN [1] {ECO:0000313|EMBL:RID85430.1, ECO:0000313|Proteomes:UP000266016}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MA001 {ECO:0000313|EMBL:RID85430.1,
RC ECO:0000313|Proteomes:UP000266016};
RA Seuylemezian A., Vaishampayan P.;
RT "Bacillus jemisoniae sp. nov., Bacillus chryseoplanitiae sp. nov., Bacillus
RT resnikiae sp. nov., and Bacillus frankliniae sp. nov., isolated from Viking
RT spacecraft and associated surfaces.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RID85430.1}.
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DR EMBL; QWVS01000018; RID85430.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A398BC93; -.
DR Proteomes; UP000266016; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR030828; HTH_TypR.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF18024; HTH_50; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000266016};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..59
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 75..127
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 158..387
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 472 AA; 53777 MW; 3D8C7620284AA51D CRC64;
MTYKRDLEFY DFERIADILY DGIYIADKHG KTVFVNKAYE RITGLKREQV VGKYVGDLIE
TGLFNYGVTP DVIKTKKQIN ATSTIHNGVT VLITGTPLFN NKGEVELIVV TNRDMSDLLR
IENELKKSKE QMKIVEKTEE KNIQEIEHLR KKSVESKIIG ESEEIKNIIQ MINQVAKLDV
NVLITGETGV GKEVVSNEIY MNSTRHNKPF IKVNCAAIPA NLLEAELFGY EKGAFTGAST
KGKLGLFELA NHGTILLDEI ADMPLDLQVK LLRVIQQREI TRIGGTKPIR LDVRIIAATH
GDLKELVSKG KFREDLYYRL YVFPIYIPPL RVRTSDIEKL TDYFLTVYNN KYGKEITFKK
DALLVWESYS WPGNIRELQN VLERLVIISN PSEIITSSKV KKLLNIEMDD KESIGSGESY
KKIIESFEKK VLQNAIDLYG TTRKVAEHLK IDQSTVVKKA KKLGIKLKKI NN
//
