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Database: UniProt
Entry: A0A398BG96_9BACI
LinkDB: A0A398BG96_9BACI
Original site: A0A398BG96_9BACI 
ID   A0A398BG96_9BACI        Unreviewed;       570 AA.
AC   A0A398BG96;
DT   05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   SubName: Full=Sigma-54-dependent transcriptional regulator {ECO:0000313|EMBL:RID89345.1};
GN   ORFNames=D1953_01920 {ECO:0000313|EMBL:RID89345.1};
OS   Peribacillus asahii.
OC   Bacteria; Bacillota; Bacilli; Bacillales; Bacillaceae; Peribacillus.
OX   NCBI_TaxID=228899 {ECO:0000313|EMBL:RID89345.1, ECO:0000313|Proteomes:UP000266016};
RN   [1] {ECO:0000313|EMBL:RID89345.1, ECO:0000313|Proteomes:UP000266016}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MA001 {ECO:0000313|EMBL:RID89345.1,
RC   ECO:0000313|Proteomes:UP000266016};
RA   Seuylemezian A., Vaishampayan P.;
RT   "Bacillus jemisoniae sp. nov., Bacillus chryseoplanitiae sp. nov., Bacillus
RT   resnikiae sp. nov., and Bacillus frankliniae sp. nov., isolated from Viking
RT   spacecraft and associated surfaces.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RID89345.1}.
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DR   EMBL; QWVS01000002; RID89345.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A398BG96; -.
DR   Proteomes; UP000266016; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR   CDD; cd00009; AAA; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 1.10.8.60; -; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR002197; HTH_Fis.
DR   InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR013767; PAS_fold.
DR   InterPro; IPR002078; Sigma_54_int.
DR   InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR   InterPro; IPR025944; Sigma_54_int_dom_CS.
DR   NCBIfam; TIGR00229; sensory_box; 1.
DR   PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR   PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR   Pfam; PF02954; HTH_8; 1.
DR   Pfam; PF00989; PAS; 1.
DR   Pfam; PF00158; Sigma54_activat; 1.
DR   PRINTS; PR01590; HTHFIS.
DR   SMART; SM00382; AAA; 1.
DR   SMART; SM00091; PAS; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50112; PAS; 1.
DR   PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR   PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR   PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000266016};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT   DOMAIN          116..172
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          250..480
FT                   /note="Sigma-54 factor interaction"
FT                   /evidence="ECO:0000259|PROSITE:PS50045"
SQ   SEQUENCE   570 AA;  63239 MW;  1A0767A379760E3D CRC64;
     MQNVMIVGAG QGGTTLLNIL LESDAFSVLC MVDINREAPG MQLAKGFHIP TALSWKNEYT
     NKADIIIDTS GNESVFQEIR REKGHEALLI PGSVAQIIAK LSKEKQQLIH KLKTESNTML
     EAIIQSSDEA ISVVDEQGRG LLINPAYTRI TGLTKEQVIG KPATTDIYEG DSMHMQVLET
     RKPVRGVNMC VGPRRKEVIV NVAPIIVDGE LKGSVGVIHD VSEIQKLTTE LKHAQRLIRT
     LQAKYSFEDI IGQSDDMVLA IEQAKLSAKT PATVLLRGES GTGKELFAHA IHNESDRKFN
     KFIRVNCAAV SESLLESELF GYEDGAFTGA KRGGKIGFFE EANHGSLFLD EIGELTPKIQ
     AKLLRVLQER EIMRVGGTKP IPINVRVIAA TNIDLEQSIK NGSFREDLYF RLNRMPIFIA
     PLRKRKGEMK ELAEHLIHKI NQEYGRGIEG ISEDAIEKLR QYDWPGNVRE LENILGRAII
     LMKLNEQVIE AKHIPNLVGT SAEHSKESAV LFTPSFKSGE SLNEMVGAYE AKVIQQALQT
     FKGNKTLAAK ALGISVRSLY YKMEKTNLCK
//
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