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Database: UniProt
Entry: A0A399J124_9RHOB
LinkDB: A0A399J124_9RHOB
Original site: A0A399J124_9RHOB 
ID   A0A399J124_9RHOB        Unreviewed;       557 AA.
AC   A0A399J124;
DT   05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 1.
DT   24-JAN-2024, entry version 17.
DE   SubName: Full=Ribonuclease J {ECO:0000313|EMBL:RII39075.1};
GN   ORFNames=DL237_07870 {ECO:0000313|EMBL:RII39075.1};
OS   Pseudopuniceibacterium sediminis.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae; Pseudopuniceibacterium.
OX   NCBI_TaxID=2211117 {ECO:0000313|EMBL:RII39075.1, ECO:0000313|Proteomes:UP000265848};
RN   [1] {ECO:0000313|EMBL:RII39075.1, ECO:0000313|Proteomes:UP000265848}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CY03 {ECO:0000313|EMBL:RII39075.1,
RC   ECO:0000313|Proteomes:UP000265848};
RA   Zhang Y.-J.;
RT   "Pseudooceanicola sediminis CY03 in the family Rhodobacteracea.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RII39075.1}.
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DR   EMBL; QWJJ01000006; RII39075.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A399J124; -.
DR   OrthoDB; 9770211at2; -.
DR   Proteomes; UP000265848; Unassembled WGS sequence.
DR   GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   CDD; cd07714; RNaseJ_MBL-fold; 1.
DR   Gene3D; 3.10.20.580; -; 1.
DR   Gene3D; 3.40.50.10710; Metallo-hydrolase/oxidoreductase; 1.
DR   Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR   InterPro; IPR001279; Metallo-B-lactamas.
DR   InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR   InterPro; IPR011108; RMMBL.
DR   InterPro; IPR042173; RNase_J_2.
DR   InterPro; IPR041636; RNase_J_C.
DR   InterPro; IPR001587; RNase_J_CS.
DR   PANTHER; PTHR43694; RIBONUCLEASE J; 1.
DR   PANTHER; PTHR43694:SF1; RIBONUCLEASE J; 1.
DR   Pfam; PF00753; Lactamase_B; 1.
DR   Pfam; PF07521; RMMBL; 1.
DR   Pfam; PF17770; RNase_J_C; 1.
DR   SMART; SM00849; Lactamase_B; 1.
DR   SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
DR   PROSITE; PS01292; UPF0036; 1.
PE   4: Predicted;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          18..219
FT                   /note="Metallo-beta-lactamase"
FT                   /evidence="ECO:0000259|SMART:SM00849"
SQ   SEQUENCE   557 AA;  60627 MW;  443A94F81AEFFF89 CRC64;
     MSNDRLIYLP LGGAGEIGMN AYVYGYGPAG KERLILVDIG VAFPDMETTP GVDLIFADIS
     WLVKNKKRLE AVFITHAHED HVGAIGHLYH RLGAPVIHTR AFTANIARGK LAEYGIGDHA
     VTTASPWPAT VKAGPFNIGF LPISHSIPES SALVIDTPQG RVIHTGDFKL DLNPLVGEAF
     DEELWRDVSK PGVKALICDS TNIFSPNPGR SESEVGPEVQ TLIAEASGML VATTFASNVA
     RVRTLAEAGE RAGRSICLMG RAMRRMVEAS LETGVLERFP KVVSTEEARE IPRENLMLIV
     TGSQGERRAA SAQLARGKFH GMQMQEGDTF LFSSKTIPGN EKGVIAIMNA FSEQGVDVID
     DSNGRYHVSG HANRPDLEKM QDVVNPQMVI PMHGEHRHLR EHAKMTLAKG RAAVVCVNGM
     MLDLSGNQPK VAEYIESGRT YLDGSVQIGA MDGIVRDRIR MALNGHVTVT FVLDEQDEPL
     GEPWCDLMGL PETGRSSAPL TDVLEQDLSQ FIGRADAKTL MNDTKLEEAL RRVVRNTSQD
     EIGKKPEVTV VISRLSA
//
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