ID A0A399J124_9RHOB Unreviewed; 557 AA.
AC A0A399J124;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=Ribonuclease J {ECO:0000313|EMBL:RII39075.1};
GN ORFNames=DL237_07870 {ECO:0000313|EMBL:RII39075.1};
OS Pseudopuniceibacterium sediminis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Pseudopuniceibacterium.
OX NCBI_TaxID=2211117 {ECO:0000313|EMBL:RII39075.1, ECO:0000313|Proteomes:UP000265848};
RN [1] {ECO:0000313|EMBL:RII39075.1, ECO:0000313|Proteomes:UP000265848}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CY03 {ECO:0000313|EMBL:RII39075.1,
RC ECO:0000313|Proteomes:UP000265848};
RA Zhang Y.-J.;
RT "Pseudooceanicola sediminis CY03 in the family Rhodobacteracea.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RII39075.1}.
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DR EMBL; QWJJ01000006; RII39075.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A399J124; -.
DR OrthoDB; 9770211at2; -.
DR Proteomes; UP000265848; Unassembled WGS sequence.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd07714; RNaseJ_MBL-fold; 1.
DR Gene3D; 3.10.20.580; -; 1.
DR Gene3D; 3.40.50.10710; Metallo-hydrolase/oxidoreductase; 1.
DR Gene3D; 3.60.15.10; Ribonuclease Z/Hydroxyacylglutathione hydrolase-like; 1.
DR InterPro; IPR001279; Metallo-B-lactamas.
DR InterPro; IPR036866; RibonucZ/Hydroxyglut_hydro.
DR InterPro; IPR011108; RMMBL.
DR InterPro; IPR042173; RNase_J_2.
DR InterPro; IPR041636; RNase_J_C.
DR InterPro; IPR001587; RNase_J_CS.
DR PANTHER; PTHR43694; RIBONUCLEASE J; 1.
DR PANTHER; PTHR43694:SF1; RIBONUCLEASE J; 1.
DR Pfam; PF00753; Lactamase_B; 1.
DR Pfam; PF07521; RMMBL; 1.
DR Pfam; PF17770; RNase_J_C; 1.
DR SMART; SM00849; Lactamase_B; 1.
DR SUPFAM; SSF56281; Metallo-hydrolase/oxidoreductase; 1.
DR PROSITE; PS01292; UPF0036; 1.
PE 4: Predicted;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 18..219
FT /note="Metallo-beta-lactamase"
FT /evidence="ECO:0000259|SMART:SM00849"
SQ SEQUENCE 557 AA; 60627 MW; 443A94F81AEFFF89 CRC64;
MSNDRLIYLP LGGAGEIGMN AYVYGYGPAG KERLILVDIG VAFPDMETTP GVDLIFADIS
WLVKNKKRLE AVFITHAHED HVGAIGHLYH RLGAPVIHTR AFTANIARGK LAEYGIGDHA
VTTASPWPAT VKAGPFNIGF LPISHSIPES SALVIDTPQG RVIHTGDFKL DLNPLVGEAF
DEELWRDVSK PGVKALICDS TNIFSPNPGR SESEVGPEVQ TLIAEASGML VATTFASNVA
RVRTLAEAGE RAGRSICLMG RAMRRMVEAS LETGVLERFP KVVSTEEARE IPRENLMLIV
TGSQGERRAA SAQLARGKFH GMQMQEGDTF LFSSKTIPGN EKGVIAIMNA FSEQGVDVID
DSNGRYHVSG HANRPDLEKM QDVVNPQMVI PMHGEHRHLR EHAKMTLAKG RAAVVCVNGM
MLDLSGNQPK VAEYIESGRT YLDGSVQIGA MDGIVRDRIR MALNGHVTVT FVLDEQDEPL
GEPWCDLMGL PETGRSSAPL TDVLEQDLSQ FIGRADAKTL MNDTKLEEAL RRVVRNTSQD
EIGKKPEVTV VISRLSA
//