ID A0A399J4N2_9RHOB Unreviewed; 1095 AA.
AC A0A399J4N2;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE SubName: Full=TM0106 family RecB-like putative nuclease {ECO:0000313|EMBL:RII38922.1};
GN ORFNames=DL237_09565 {ECO:0000313|EMBL:RII38922.1};
OS Pseudooceanicola sediminis.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae; Pseudooceanicola.
OX NCBI_TaxID=2211117 {ECO:0000313|EMBL:RII38922.1, ECO:0000313|Proteomes:UP000265848};
RN [1] {ECO:0000313|EMBL:RII38922.1, ECO:0000313|Proteomes:UP000265848}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CY03 {ECO:0000313|EMBL:RII38922.1,
RC ECO:0000313|Proteomes:UP000265848};
RA Zhang Y.-J.;
RT "Pseudooceanicola sediminis CY03 in the family Rhodobacteracea.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RII38922.1}.
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DR EMBL; QWJJ01000007; RII38922.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A399J4N2; -.
DR OrthoDB; 9757917at2; -.
DR Proteomes; UP000265848; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR CDD; cd17934; DEXXQc_Upf1-like; 1.
DR CDD; cd18808; SF1_C_Upf1; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR045055; DNA2/NAM7-like.
DR InterPro; IPR041679; DNA2/NAM7-like_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR019993; RecB_nuclease_TM0106_put.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR047187; SF1_C_Upf1.
DR InterPro; IPR038720; YprB_RNase_H-like_dom.
DR NCBIfam; TIGR03491; TM0106 family RecB-like putative nuclease; 1.
DR PANTHER; PTHR10887; DNA2/NAM7 HELICASE FAMILY; 1.
DR PANTHER; PTHR10887:SF525; HELICASE SENATAXIN-RELATED; 1.
DR Pfam; PF13087; AAA_12; 1.
DR Pfam; PF13604; AAA_30; 1.
DR Pfam; PF13482; RNase_H_2; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
FT DOMAIN 312..485
FT /note="YprB ribonuclease H-like"
FT /evidence="ECO:0000259|Pfam:PF13482"
FT DOMAIN 890..1065
FT /note="DNA2/NAM7 helicase-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF13087"
SQ SEQUENCE 1095 AA; 119877 MW; A37F2886A84DC9CC CRC64;
MRDLDGRIFL SATDLMRFTG CAHATTLDLA HMRGTGPEPG DDTEDAALLQ KQGDAHEAAH
LARLKEAGRT VMEIERGKLS ENAEATRAAL AAGPDVVFQG AFLSGNWGGW SDFLERVETP
SALGSFSYEV ADTKLKRRAD PKHVLQLVLY SDLLAEIQGV VPEFAHVELG DGTRATLRLA
DYAAYARMAR ERLEAFIADP QPTRPVPCAD CGLCRWADHC NSVWQAEDSL FNVANISRGQ
VKKLEAAGVH TLEALSTLDH PVRGMAENTQ ARLVTQARLQ QARKTGEPDF ELRAPEPSKG
FDLLPEPQPG DLFYDIEGDP HYEGGLEYLH GIWFDGAFKA FWAHDHDAEA RALSDLLAFF
RARISQYPTA RIYHYAPYEI TALKRLTTKY GIGEAFLDRL LRERRFVDLF AVVRGGLIGS
EPNYSIKSME AFYDRKRDGE VKTAGGSVVA YERWRETQDQ QILDEIEDYN RVDCISTEEL
RDWLVGIRPS GPWPTLAPDA GEKEIEEDAD TQALRNMLAG SGLPEARQDM LFNLGVFHSR
EVKPAQWAVF DSAAKDEDDL LDDLDALGGL EAAGPVEPVK RSFARRYTYP EQETKLRSGK
KATVPVFDSP PTTVGIESMD RRARQITVKA GPGKADLLAD QLTLHPDWPI QTGVIAGALR
DVIADQCGAR RYTAVDDLLS RAAPRLGSGP RGDLLGGADP VEGTIAVVND MDETVLPIQG
PPGTGKTYVS ARAILSLVRK GHRVGVASNS HEAIRNVLMG CLSALEDEDL PINLELVHKV
SGSEDGYPED CDVHRTTDNA EAANGGHVVG GTAWFFSRDE NVQAFDWLFV DEAGQVGLAN
MAAMGRAARN IVLVGDPRQL PQVIQGAHLE PANLSCLDWM LGEHATVPAE RGIFLPTSRR
MHPEVCRFVS EQVYEGRLSS HPDTANQCVT GTALPEAGAF WVPVPHEGNA QIAQEEVAAI
GKTVTDLLDS SWKEKDGSTR PMRETDIIVV APYNAQVNAL RDALPSSVRV GTVDKFQGQE
APVCLVSMTA SSAEETSRGM EFLFSLNRIN VAVSRAKGLA LVFGAPRLRE AKCNTVEQMQ
LVNTLCALET FWGTI
//
