ID A0A3A5J4Y9_9GAMM Unreviewed; 167 AA.
AC A0A3A5J4Y9;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:RJS93728.1};
GN ORFNames=D3260_06570 {ECO:0000313|EMBL:RJS93728.1};
OS Salinisphaera sp. Q1T1-3.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Salinisphaerales;
OC Salinisphaeraceae; Salinisphaera.
OX NCBI_TaxID=2321229 {ECO:0000313|EMBL:RJS93728.1, ECO:0000313|Proteomes:UP000269039};
RN [1] {ECO:0000313|EMBL:RJS93728.1, ECO:0000313|Proteomes:UP000269039}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Q1T1-3 {ECO:0000313|EMBL:RJS93728.1,
RC ECO:0000313|Proteomes:UP000269039};
RA Zayas Rivera J., Montalvo Rodriguez R.;
RT "Draft Genome of Salinisphaera endophytica, a Novel Species of the
RT Salinisphaera Genus Isolated as an Endophyte of Avicennia germinans, at the
RT Solar Salterns of Cabo Rojo.";
RL Submitted (SEP-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC {ECO:0000256|ARBA:ARBA00010641}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:RJS93728.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; QZWD01000005; RJS93728.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3A5J4Y9; -.
DR OrthoDB; 9797134at2; -.
DR Proteomes; UP000269039; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR039425; RNA_pol_sigma-70-like.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR PANTHER; PTHR43133:SF69; RNA POLYMERASE SIGMA FACTOR FECI-RELATED; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000269039};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023082};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023082}.
FT DOMAIN 132..152
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 167 AA; 19214 MW; 19F17E868878BEAF CRC64;
MKKNRQQRLD EVFRKDYSWL TNKLRYRTGD PDKAADIASE SFVQFAAVRE LDSVREPRAM
LTTIANRVFF NTLRRRSLYQ NYLQLLAQMP TTIEVSAEDQ NAMMDALLAV DRAFDTLPEK
ARQAFVYCRL EGLTQAEAAA KIGVSKSMVR QYIAAVQTRL EEVVQNP
//
