ID   A0A3B0MTB4_9RHOB        Unreviewed;       535 AA.
AC   A0A3B0MTB4;
DT   05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 1.
DT   24-JAN-2024, entry version 18.
DE   RecName: Full=Murein L,D-transpeptidase {ECO:0008006|Google:ProtNLM};
GN   ORFNames=ROE7235_01826 {ECO:0000313|EMBL:SUZ32074.1};
OS   Roseibaca ekhonensis.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC   Paracoccaceae; Roseibaca.
OX   NCBI_TaxID=254356 {ECO:0000313|EMBL:SUZ32074.1, ECO:0000313|Proteomes:UP000272908};
RN   [1] {ECO:0000313|Proteomes:UP000272908}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CECT 7235 {ECO:0000313|Proteomes:UP000272908};
RA   Rodrigo-Torres L., Arahal R. D., Lucena T.;
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC       {ECO:0000256|ARBA:ARBA00004752}.
CC   -!- SIMILARITY: Belongs to the YkuD family.
CC       {ECO:0000256|ARBA:ARBA00005992}.
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DR   EMBL; UIHC01000015; SUZ32074.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3B0MTB4; -.
DR   OrthoDB; 9778545at2; -.
DR   UniPathway; UPA00219; -.
DR   Proteomes; UP000272908; Unassembled WGS sequence.
DR   GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd16913; YkuD_like; 1.
DR   Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR   Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR   InterPro; IPR005490; LD_TPept_cat_dom.
DR   InterPro; IPR045380; LD_TPept_scaffold_dom.
DR   InterPro; IPR002477; Peptidoglycan-bd-like.
DR   InterPro; IPR036365; PGBD-like_sf.
DR   InterPro; IPR036366; PGBDSf.
DR   InterPro; IPR038063; Transpep_catalytic_dom.
DR   PANTHER; PTHR41533:SF2; BLR7131 PROTEIN; 1.
DR   PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR   Pfam; PF01471; PG_binding_1; 1.
DR   Pfam; PF20142; Scaffold; 1.
DR   Pfam; PF03734; YkuD; 1.
DR   SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR   SUPFAM; SSF47090; PGBD-like; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000272908};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          55..187
FT                   /note="L,D-transpeptidase scaffold"
FT                   /evidence="ECO:0000259|Pfam:PF20142"
FT   DOMAIN          215..271
FT                   /note="Peptidoglycan binding-like"
FT                   /evidence="ECO:0000259|Pfam:PF01471"
FT   DOMAIN          299..458
FT                   /note="L,D-transpeptidase catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF03734"
SQ   SEQUENCE   535 AA;  58876 MW;  E3A570EF05E84E78 CRC64;
     MGHFKGVASH TRRLVAGLTV GILTVGGFSA GSALAQHFPA FEQAVAEGIS DNEGLSEFYR
     SVQYEDVWTG ADDAPRRTAF MTALTRAPEH GLPVQRYDVP GLMAAFEAVE SERDRGFLEA
     RMSQTFLQFA NDLHSGVLDP ARVDRAIVRD LPRPDPAQLM AEFVKAPAAG YIRNLAPTAP
     EYARLFRAKR DLEAAIGQGG WGPAVAQVRF APGSTGPAVV ALRNRLIAMG YLERSAAASY
     DGVLQTAVQR FQVNHGIEAD GIAGPATIRA LNVSPRDRLE GVIVAMERER WMNIPRGSRH
     VWVNLTDYYA RIVDNDIVTF ETKAIVGARS DGKPTPEFSE TMKYLEINPD WTLPRSILAR
     SYWGALASGG AQHLQIVDAS GRVVPRGAIN FGRYTPATFP FNVRQPPGPT NALGEVKFMF
     PNPYAIYLHD TPTQHLFSTT VRTHSSGCVR LDDPRDFAYE LLSRQSDSPR DLYHSILNTG
     QQTRLYLDTP VPVHLVYRTA FTNVRGELNF RDDMYGRDAK IYRALVAAGA VNPAS
//