ID A0A3B1IM03_ASTMX Unreviewed; 632 AA.
AC A0A3B1IM03;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Zinc finger matrin-type protein 1-like {ECO:0000313|Ensembl:ENSAMXP00000030590.1};
OS Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes;
OC Characoidei; Characidae; Astyanax.
OX NCBI_TaxID=7994 {ECO:0000313|Ensembl:ENSAMXP00000030590.1, ECO:0000313|Proteomes:UP000018467};
RN [1] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RA Jeffery W., Warren W., Wilson R.K.;
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RX PubMed=25329095; DOI=10.1038/ncomms6307;
RA McGaugh S.E., Gross J.B., Aken B., Blin M., Borowsky R., Chalopin D.,
RA Hinaux H., Jeffery W.R., Keene A., Ma L., Minx P., Murphy D., O'Quin K.E.,
RA Retaux S., Rohner N., Searle S.M., Stahl B.A., Tabin C., Volff J.N.,
RA Yoshizawa M., Warren W.C.;
RT "The cavefish genome reveals candidate genes for eye loss.";
RL Nat. Commun. 5:5307-5307(2014).
RN [3] {ECO:0000313|Ensembl:ENSAMXP00000030590.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3B1IM03; -.
DR STRING; 7994.ENSAMXP00000030590; -.
DR Ensembl; ENSAMXT00000047274.1; ENSAMXP00000030590.1; ENSAMXG00000040757.1.
DR GeneTree; ENSGT00940000156888; -.
DR InParanoid; A0A3B1IM03; -.
DR OrthoDB; 3094294at2759; -.
DR Proteomes; UP000018467; Unassembled WGS sequence.
DR Bgee; ENSAMXG00000040757; Expressed in muscle tissue and 12 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 4.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR46144:SF1; C2H2-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46144; ZINC FINGER PROTEIN 385B-LIKE; 1.
DR Pfam; PF12874; zf-met; 4.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SMART; SM00451; ZnF_U1; 4.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 4.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000018467};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 117..139
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS00028"
FT REGION 169..195
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 307..632
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 330..358
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..438
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 458..473
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 481..536
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 549..572
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 607..626
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 632 AA; 71949 MW; C38C5817C93B21D2 CRC64;
MSVLEGGVSC GVTLDVENNG TVYPDSVQTV QNTNAPSCDV EDTGNDNELL KGLLTDTFCQ
VCEAVLLFES QRVSHYEGKK HAQKVRLYLQ TKKAERIMQS QANSSFQSIN VNPEKFCELC
NMVFSSPVVA KSHYEGKVHS KNMRKNDTTP TTADLKTTAV PVTVPVAPRE GAIESKADQE
LKDSPDSPPQ EVNLNDPDKY CKLCTASFNN PVMAQQHYSG RKHQRNQARQ EMLGKLSSES
ETANTLTCPV CCVTLSSVET YEAHMQGNKH FVKEKKTVGL CKSQKKVYDS FQDELADYIQ
VQKSRGLEPK AKAEEELNDS ESLGEEPEMP PPSSRLPPPP PHLSALPSFR PPQWRPPFQP
QTGLFGYRGR FPTHLMQHQW GQGYPPHPPP LIPGLTGRSF RRGRSPSSFS SSSSYSDSSS
SYSSSTSRSR SSSSDSGSDS SSDRRRQRTR KRKERMMKRR REQDDDSNKD ERRRSSKRRR
RGREDKEEEE EGHTNKAKRE KKVGFEKDED KERRKRKEKR HRGGDSSEED EHGTKRRLGK
KNRREKEVRY GKRRREEDKE VAREEGEEQR EGVQIKGVQS TAGEPTEERT ELRGEEKSKR
KKEKKKAKGK TDEGDKRTEE EKLWDETILG IF
//
