ID A0A3B1IPH9_ASTMX Unreviewed; 576 AA.
AC A0A3B1IPH9;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Zgc:65851 {ECO:0000313|Ensembl:ENSAMXP00000031857.1};
OS Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes;
OC Characoidei; Characidae; Astyanax.
OX NCBI_TaxID=7994 {ECO:0000313|Ensembl:ENSAMXP00000031857.1, ECO:0000313|Proteomes:UP000018467};
RN [1] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RA Jeffery W., Warren W., Wilson R.K.;
RL Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000018467}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=female {ECO:0000313|Proteomes:UP000018467};
RX PubMed=25329095; DOI=10.1038/ncomms6307;
RA McGaugh S.E., Gross J.B., Aken B., Blin M., Borowsky R., Chalopin D.,
RA Hinaux H., Jeffery W.R., Keene A., Ma L., Minx P., Murphy D., O'Quin K.E.,
RA Retaux S., Rohner N., Searle S.M., Stahl B.A., Tabin C., Volff J.N.,
RA Yoshizawa M., Warren W.C.;
RT "The cavefish genome reveals candidate genes for eye loss.";
RL Nat. Commun. 5:5307-5307(2014).
RN [3] {ECO:0000313|Ensembl:ENSAMXP00000031857.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR AlphaFoldDB; A0A3B1IPH9; -.
DR STRING; 7994.ENSAMXP00000031857; -.
DR Ensembl; ENSAMXT00000041493.1; ENSAMXP00000031857.1; ENSAMXG00000035263.1.
DR GeneTree; ENSGT00940000165501; -.
DR InParanoid; A0A3B1IPH9; -.
DR Proteomes; UP000018467; Unassembled WGS sequence.
DR Bgee; ENSAMXG00000035263; Expressed in brain and 3 other cell types or tissues.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.170; -; 1.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR Gene3D; 1.20.5.1160; Vasodilator-stimulated phosphoprotein; 1.
DR InterPro; IPR039008; IF_rod_dom.
DR PANTHER; PTHR45652; GLIAL FIBRILLARY ACIDIC PROTEIN; 1.
DR PANTHER; PTHR45652:SF13; ZGC:65851; 1.
DR Pfam; PF00038; Filament; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR PROSITE; PS51842; IF_ROD_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754};
KW Reference proteome {ECO:0000313|Proteomes:UP000018467}.
FT DOMAIN 66..366
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT REGION 147..175
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 400..576
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 295..347
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 403..500
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..576
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 576 AA; 65657 MW; C6A9C3B32F2E4EBB CRC64;
MAFTGDLYSS SYRRIYSDAP RRMTSASSRY AHAAPRVGSR LALDATTDLA HTAAVTNEMK
IIRTSEKEQL QGLNDRFVCF IEKVRALEQR NRALEAEAAQ LRERHREPSR LRDLYEREVR
DLRARADELA RDASRLRVER AQAGEALESA REQLAEETRR REEAERGASG CRRDAEEAAL
ARHDLERRVE ALLEEIEFLR RVHEEELREM QAALQATQVS VEMDVSRPDL AVALKDIRSQ
YEALSSRNQL QADEWYRSKF ASVTEAAARN NDAIKQAKDE LGDCRRQVQA RTLEVEALRG
HNEALERQLA EMEERHSNEI SEMQEAIQQL EEALRGTKGE MSRHLREYQE LLSEHWKLLE
GEETRLSTVS GALLQSAYPG MSYTSGRTFM LGAYRTTIAK PAEEEEEEEA EEEEAEEEEK
EEEEAAEEEE GEGEAEAEAE AEGEEEEGEG EGEGEEEAEA EAEEEEEGGD EEEAGEEQEE
AAEEEEEGSG EAEEEVEEEK EEKKEEKKKE EKKQEKKQVE ESKPKEKETK KEEKKEEKKE
EKKSESKASN NNKSESKSEK SDGSKAEKSA PAAKSK
//
