ID A0A3B3BSZ7_ORYME Unreviewed; 165 AA.
AC A0A3B3BSZ7;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=LIM domain only 4 {ECO:0000313|Ensembl:ENSOMEP00000008474.1};
DE SubName: Full=LIM domain transcription factor LMO4 {ECO:0000313|EMBL:KAF6728688.1};
GN ORFNames=FQA47_023262 {ECO:0000313|EMBL:KAF6728688.1};
OS Oryzias melastigma (Marine medaka).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=30732 {ECO:0000313|Ensembl:ENSOMEP00000008474.1, ECO:0000313|Proteomes:UP000261560};
RN [1] {ECO:0000313|Ensembl:ENSOMEP00000008474.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
RN [2] {ECO:0000313|EMBL:KAF6728688.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bigg-433 {ECO:0000313|EMBL:KAF6728688.1};
RX PubMed=32938378;
RA Liang P., Saqib H.S.A., Ni X., Shen Y.;
RT "Long-read sequencing and de novo genome assembly of marine medaka (Oryzias
RT melastigma).";
RL BMC Genomics 21:0-0(0).
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DR EMBL; WKFB01000273; KAF6728688.1; -; Genomic_DNA.
DR Ensembl; ENSOMET00000002392.1; ENSOMEP00000008474.1; ENSOMEG00000009642.1.
DR GeneTree; ENSGT00940000157730; -.
DR OrthoDB; 2875464at2759; -.
DR Proteomes; UP000261560; Unplaced.
DR Proteomes; UP000646548; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd09386; LIM1_LMO4; 1.
DR CDD; cd09387; LIM2_LMO4; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 2.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR45787; LD11652P; 1.
DR PANTHER; PTHR45787:SF5; LIM DOMAIN TRANSCRIPTION FACTOR LMO4; 1.
DR Pfam; PF00412; LIM; 2.
DR SMART; SM00132; LIM; 2.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 4.
DR PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 2.
PE 4: Predicted;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000646548};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 21..83
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 85..147
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
SQ SEQUENCE 165 AA; 17939 MW; A13BA98832FF7345 CRC64;
MVNPGGSSQP PAVGAGSLSW KRCAGCGGKI ADRFLLYTMD TYWHSRCLKC SCCQAQLGEI
GTSCYTKSGM ILCRNDYIRL FGNSGACSAC GQSIPASELV MRAQGNVYHL KCFTCSTCRN
RLVPGDRFHY INGSLFCEHD RPTALINGHL SSLQTNPLLP DQKVC
//
