ID A0A3B3BY15_ORYME Unreviewed; 741 AA.
AC A0A3B3BY15;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=Cytoplasmic polyadenylation element-binding protein 4 {ECO:0000313|EMBL:KAF6731305.1, ECO:0000313|Ensembl:ENSOMEP00000009938.1};
GN ORFNames=FQA47_004672 {ECO:0000313|EMBL:KAF6731305.1};
OS Oryzias melastigma (Marine medaka).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=30732 {ECO:0000313|Ensembl:ENSOMEP00000009938.1, ECO:0000313|Proteomes:UP000261560};
RN [1] {ECO:0000313|Ensembl:ENSOMEP00000009938.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
RN [2] {ECO:0000313|EMBL:KAF6731305.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Bigg-433 {ECO:0000313|EMBL:KAF6731305.1};
RX PubMed=32938378;
RA Liang P., Saqib H.S.A., Ni X., Shen Y.;
RT "Long-read sequencing and de novo genome assembly of marine medaka (Oryzias
RT melastigma).";
RL BMC Genomics 21:0-0(0).
CC -!- SIMILARITY: Belongs to the RRM CPEB family.
CC {ECO:0000256|ARBA:ARBA00010347}.
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DR EMBL; WKFB01000215; KAF6731305.1; -; Genomic_DNA.
DR STRING; 30732.ENSOMEP00000009938; -.
DR PaxDb; 30732-ENSOMEP00000009938; -.
DR Ensembl; ENSOMET00000016622.1; ENSOMEP00000009938.1; ENSOMEG00000011206.1.
DR GeneTree; ENSGT00940000154998; -.
DR OMA; GWVEDNM; -.
DR OrthoDB; 5395046at2759; -.
DR Proteomes; UP000261560; Unplaced.
DR Proteomes; UP000646548; Unassembled WGS sequence.
DR GO; GO:0003730; F:mRNA 3'-UTR binding; IEA:InterPro.
DR GO; GO:0045182; F:translation regulator activity; IEA:InterPro.
DR CDD; cd19757; Bbox1; 1.
DR CDD; cd12724; RRM1_CPEB2_like; 1.
DR CDD; cd12726; RRM2_CPEB2_like; 1.
DR Gene3D; 3.30.70.330; -; 2.
DR Gene3D; 4.10.640.40; Cytoplasmic polyadenylation element-binding protein, ZZ domain; 1.
DR InterPro; IPR032296; CEBP_ZZ.
DR InterPro; IPR038446; CEBP_ZZ_sf.
DR InterPro; IPR034819; CPEB.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR12566; CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB; 1.
DR PANTHER; PTHR12566:SF18; CYTOPLASMIC POLYADENYLATION ELEMENT-BINDING PROTEIN 4-RELATED; 1.
DR Pfam; PF16366; CEBP_ZZ; 1.
DR Pfam; PF16367; RRM_7; 1.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 2.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000646548};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 484..571
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 592..670
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 15..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 85..137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 203..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 89..103
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 224..272
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 279..312
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 337..357
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 741 AA; 81074 MW; 78CD5E53411E4E37 CRC64;
MGDYGFGVLV KSGSSNKPAF PVRIPPHLQS HLPSNPPSPP SFINNTCSTN GGSAWLFPPV
AQHTNMQDEI LEPDKSKALD LQDVPEKPQV QAHPQTSSPG QPEPGGGLTE IEGALAEDGS
LEKGSLESSG GKEKLRMESP VLSSFDYQDS LGMGSSCAQS TSSSSSLISF NNWSPAVPST
QSPVVGEDVG GFLGPAGTNA NGPPLLFQNF SPHPAPGFGG SFSPQIGPVS QHHPPTPHSQ
HYHPHSPGVQ QHRHSPASPH QPQTSFTQHP HRAGPFSQLP HLATSQNKSH SPWGSYQSPS
TPTSTSWNPG GYGGWGGTQG IRDCRRGVGG GMSGLNSISP MKKSFPNNQL PSQKFLRNNS
GINQKGWVED NMNRNDNVYP FQPDRTRPFD GFSMVSLENS LIDIMRAEQD SLKGRYSFSH
QSGDGPLPMN ARSYGRRRGN SSLFPVEDER SFAEDESVDQ GLAGLVSAHC FPHLNGERVE
RYSRKVFVGG LPPDIDEDEI TASFRRFGHL FVDWPHKAES KSYFPPKGYA FLLFQDESSV
QALIDACIQE DGKLYLCVSS PTIKDKPVQI RPWNLNDSDF VMDGSQPLDP RKTIFVGGVP
RPLRAVELAM IMDRLYGGVC YAGIDTDPEL KYPKGAGRVA FSNQQSYIAA ISARFVQLQH
GEIDKRVEVK PYVLDDQLCD ECQGTRCGGK FAPFFCANVT CLQYYCEYCW AAIHSRAGRE
FHKPLVKEGG DRPRHISFRW N
//
