ID A0A3B3BY66_ORYME Unreviewed; 747 AA.
AC A0A3B3BY66;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=TATA-box binding protein associated factor 5 {ECO:0000313|Ensembl:ENSOMEP00000009757.1};
OS Oryzias melastigma (Marine medaka).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=30732 {ECO:0000313|Ensembl:ENSOMEP00000009757.1, ECO:0000313|Proteomes:UP000261560};
RN [1] {ECO:0000313|Ensembl:ENSOMEP00000009757.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the WD repeat TAF5 family.
CC {ECO:0000256|ARBA:ARBA00009435}.
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DR AlphaFoldDB; A0A3B3BY66; -.
DR STRING; 30732.ENSOMEP00000009757; -.
DR PaxDb; 30732-ENSOMEP00000009757; -.
DR Ensembl; ENSOMET00000000239.1; ENSOMEP00000009757.1; ENSOMEG00000011058.1.
DR GeneTree; ENSGT00940000153342; -.
DR OMA; RCAFAPE; -.
DR Proteomes; UP000261560; Unplaced.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR CDD; cd08044; TAF5_NTD2; 1.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 1.25.40.500; TFIID subunit TAF5, NTD2 domain; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR007582; TFIID_NTD2.
DR InterPro; IPR037264; TFIID_NTD2_sf.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19879; TRANSCRIPTION INITIATION FACTOR TFIID; 1.
DR PANTHER; PTHR19879:SF4; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 5; 1.
DR Pfam; PF04494; TFIID_NTD2; 1.
DR Pfam; PF00400; WD40; 6.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF160897; Taf5 N-terminal domain-like; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 5.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 157..285
FT /note="TFIID subunit TAF5 NTD2"
FT /evidence="ECO:0000259|Pfam:PF04494"
FT REPEAT 414..455
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 487..520
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 529..560
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 571..612
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 613..654
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 655..687
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 92..111
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 332..380
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 22..57
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 747 AA; 82671 MW; 7943F156EA3ED0AA CRC64;
MAAVQGGMVD EKEEVDIKTE PQSDGFVNTN ATDGRQLSPS PGSSSSAGSS KTAAGAPEDQ
QTLLAVLQFL RKNKLTESVE ILRREAGLPE DALDSKGVDC GAPGSGGSAG GVDGLDAGSL
LSRVTVSSSA GTPAPTKAVA DDQPDVSVVL SAYSQQGDPA LYKVYYSDLK KFIESVLDCH
RAELSQVFYP LFVHMYLELV YNNHESEAKA FFQKFSGDQE CYYEDDLRVL SSLTKKEHMR
GNETLLDFRT SKFVLRISRD SYQLLKRHLQ ERQNNQIWNI IQEHLYIDIF DGMPRSKSQI
DAMSGSLAGE AKREANKAKV YYGLLKEPEI ELPLDDEDEE AENEEGKPKK KKPKKDSMGS
KSKKQDPNAP SQNRIPLPEL KDSDKLDKIM YMKEATKRIR LGPENLPSIC FYTFLNAYQG
LTAVDFTDDS SLIAGGFADS TVRVWSVTPK KLRKVKSAAD LNLIDKESDD VLERIMDEKT
ASESKVLYGH SGPVYGISFS PDRNYLLSSS EDGTVRLWSL LTFTCLVGYK GHNYPVWDTQ
FSPYGYYFVS GGHDRVARLW ATDHYQPLRI FAGHLADVTC TRFHPNSNYV ATGSSDRTIR
LWDVLTGNCV RIFTGHKGPI HTLAFSPNGK FLASGATDGR VLLWDIGHGL MVSELKGHTD
TIYALRFSRD GEILASGSMD NTVRLWNAAK AFDDLETDDF TAATGHIHLQ DNSPELLLGT
YMSKSTPVIH LHFTRRNLLL AAGSYAA
//
