ID A0A3B3DLZ0_ORYME Unreviewed; 976 AA.
AC A0A3B3DLZ0;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Tripartite motif containing 24 {ECO:0000313|Ensembl:ENSOMEP00000030489.1};
OS Oryzias melastigma (Marine medaka).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=30732 {ECO:0000313|Ensembl:ENSOMEP00000030489.1, ECO:0000313|Proteomes:UP000261560};
RN [1] {ECO:0000313|Ensembl:ENSOMEP00000030489.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3B3DLZ0; -.
DR STRING; 30732.ENSOMEP00000030489; -.
DR PaxDb; 30732-ENSOMEP00000030489; -.
DR Ensembl; ENSOMET00000020962.1; ENSOMEP00000030489.1; ENSOMEG00000014766.1.
DR GeneTree; ENSGT00940000159863; -.
DR OMA; AIKQWQV; -.
DR Proteomes; UP000261560; Unplaced.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd19829; Bbox2_TIF1b_C-VI; 1.
DR CDD; cd15541; PHD_TIF1_like; 1.
DR CDD; cd16585; RING-HC_TIF1_C-VI; 1.
DR Gene3D; 1.20.920.10; Bromodomain-like; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR003649; Bbox_C.
DR InterPro; IPR001487; Bromodomain.
DR InterPro; IPR036427; Bromodomain-like_sf.
DR InterPro; IPR047058; TIF1b_Bbox2_Znf.
DR InterPro; IPR000315; Znf_B-box.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR45915; TRANSCRIPTION INTERMEDIARY FACTOR; 1.
DR PANTHER; PTHR45915:SF4; TRANSCRIPTION INTERMEDIARY FACTOR 1-ALPHA; 1.
DR Pfam; PF00439; Bromodomain; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF00643; zf-B_box; 1.
DR SMART; SM00502; BBC; 1.
DR SMART; SM00336; BBOX; 2.
DR SMART; SM00297; BROMO; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57845; B-box zinc-binding domain; 1.
DR SUPFAM; SSF47370; Bromodomain; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50014; BROMODOMAIN_2; 1.
DR PROSITE; PS50119; ZF_BBOX; 2.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Bromodomain {ECO:0000256|ARBA:ARBA00023117, ECO:0000256|PROSITE-
KW ProRule:PRU00035}; Coiled coil {ECO:0000256|SAM:Coils};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00024}.
FT DOMAIN 41..99
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 126..179
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT DOMAIN 186..227
FT /note="B box-type"
FT /evidence="ECO:0000259|PROSITE:PS50119"
FT DOMAIN 756..809
FT /note="Bromo"
FT /evidence="ECO:0000259|PROSITE:PS50014"
FT REGION 392..557
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 582..630
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 639..658
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 842..976
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 263..316
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 416..460
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 505..557
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 582..600
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 843..858
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 870..927
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 976 AA; 110258 MW; 1FF901B3DA3B8535 CRC64;
MDECAQNVDD VVIIVENEAE SLPAGEERLK PQGAFGLMDT CPSCRLSFHN REPKLLPCLH
SFCKRCLPVP GRSADPRRDL HAPLDGNKPQ NSVRCPVCRQ ECWEVDILDN FFVKDSAEVP
SSTVEKTSQV CMSCDDNTEA TGYCMECVEF LCVTCIEAHQ RVKFTRDHTI RQKEEMSPEA
LGMSTQRPVF CDVHKQEPLK LFCETCDRLT CRDCQLLKHK DHNYQFLEDA YKNHKQYLET
MTLQLQEKRK AIEEVSHCIN NGLQQVEENR RAVTNEIKKS ICNLIMEINK KGKILVNHLE
ALTKDHELNL KKQQEDVQSL TKHLDHVISF TKWATESHSG TALLYCKKLI LYQIQYLMRA
SCNPSIVPQS SVRFHCRSGF WASNVDLGSL VVERGPGRQP MTNNQTGPRA EAPLGGLSMS
QQQQQQQQQQ QQQRQSTLAQ LQMQVDKLSH QPQRPPAPNH WSWYQSVRLP GPLGPPPPTK
PIHGGSSSPS QGLPGMAQPG RRYGNPHSNP RSPTSPMLHN LINNNFPPKP VDVSQGPSRY
TQSLGSGSSP QMSLHQVSGR KMFLNKNCPI VRLNFNPDYH LAKPSSSDSR TGSTSWKHTP
EPPSAPAAKR RRRSSPGPVI VIKDEPEDED EVRFVRETHY HKGPPPTQQL ASEKKAEPEE
DPNEDWCAVC QNGGELLCCD KCPKVFHLSC HIPSLNESPS KRERRWGFYI SDVNFYASGK
GGGVAPCVQS RPQIRGEFLM KLCRNYVLEN SETRRYKELV KTPMDLSIIK KKLESQDDGS
YVNPEELVTD IRLIFFNCAK YYKSTSEIGC AGLYLEDYFE EQLKLIFPDR LFPGGREEQM
IPPLEDEIDD EEEPIREDTA VSSEEKPQSP AGKETPRAEE EKAATKSNKS EEEKPERSEE
EEKDRAAADG EKGVPTEKMK QEEAAVEKPV ENCVAAATET EGKTFLKEEI PQLPIDKPPE
TQENPAPTEE TVEDKG
//
