GenomeNet

Database: UniProt
Entry: A0A3B3HLK2_ORYLA
LinkDB: A0A3B3HLK2_ORYLA
Original site: A0A3B3HLK2_ORYLA 
ID   A0A3B3HLK2_ORYLA        Unreviewed;       351 AA.
AC   A0A3B3HLK2;
DT   05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 1.
DT   27-MAR-2024, entry version 26.
DE   SubName: Full=FtsJ RNA 2'-O-methyltransferase 1 {ECO:0000313|Ensembl:ENSORLP00000032635.1};
GN   Name=ftsj1 {ECO:0000313|Ensembl:ENSORLP00000032635.1};
OS   Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC   Oryzias.
OX   NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000032635.1, ECO:0000313|Proteomes:UP000001038};
RN   [1] {ECO:0000313|Ensembl:ENSORLP00000032635.1, ECO:0000313|Proteomes:UP000001038}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000032635.1,
RC   ECO:0000313|Proteomes:UP000001038};
RX   PubMed=17554307; DOI=10.1038/nature05846;
RA   Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA   Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA   Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA   Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA   Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA   Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT   "The medaka draft genome and insights into vertebrate genome evolution.";
RL   Nature 447:714-719(2007).
RN   [2] {ECO:0000313|Ensembl:ENSORLP00000032635.1}
RP   IDENTIFICATION.
RC   STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000032635.1};
RG   Ensembl;
RL   Submitted (NOV-2023) to UniProtKB.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   RefSeq; XP_011491017.1; XM_011492715.1.
DR   RefSeq; XP_011491018.1; XM_011492716.1.
DR   AlphaFoldDB; A0A3B3HLK2; -.
DR   STRING; 8090.ENSORLP00000032635; -.
DR   Ensembl; ENSORLT00000034102.1; ENSORLP00000032635.1; ENSORLG00000028355.1.
DR   GeneID; 101164526; -.
DR   CTD; 24140; -.
DR   GeneTree; ENSGT00730000111146; -.
DR   InParanoid; A0A3B3HLK2; -.
DR   OrthoDB; 119516at2759; -.
DR   Proteomes; UP000001038; Chromosome 6.
DR   Bgee; ENSORLG00000028355; Expressed in liver and 14 other cell types or tissues.
DR   GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR   GO; GO:0008175; F:tRNA methyltransferase activity; IBA:GO_Central.
DR   GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR   GO; GO:0030488; P:tRNA methylation; IBA:GO_Central.
DR   Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 1.
DR   HAMAP; MF_01547; RNA_methyltr_E; 1.
DR   InterPro; IPR002877; RNA_MeTrfase_FtsJ_dom.
DR   InterPro; IPR015507; rRNA-MeTfrase_E.
DR   InterPro; IPR029063; SAM-dependent_MTases_sf.
DR   PANTHER; PTHR10920; RIBOSOMAL RNA METHYLTRANSFERASE; 1.
DR   PANTHER; PTHR10920:SF12; TRNA (CYTIDINE(32)_GUANOSINE(34)-2'-O)-METHYLTRANSFERASE-RELATED; 1.
DR   Pfam; PF01728; FtsJ; 1.
DR   SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 1.
PE   3: Inferred from homology;
KW   Methyltransferase {ECO:0000256|ARBA:ARBA00022603};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001038};
KW   S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          21..159
FT                   /note="Ribosomal RNA methyltransferase FtsJ"
FT                   /evidence="ECO:0000259|Pfam:PF01728"
SQ   SEQUENCE   351 AA;  38475 MW;  6BE9C57965258C9F CRC64;
     MGRSSKDKRD IYYRLAKEEG WRARSAFKLL QLDQEFNLFT GVSRAVDLCA APGSWSQVLS
     RKLRGDEGAK EVKIVAVDLQ AMAPLPGVTQ IQGDITKVST AQEIIRHFEG QAADLVVCDG
     APDVTGLHDV DEYIQAQLLL AALNITTHVL KPGGTFVAKS PSLCVRGTPP LPVTSPTCPT
     PSWITATTWI LTSWTAQTAL SFPFWPVVTS VLLTLTGRTP YSSMQTQSII TPHHHSLPFA
     LLTSRPATSA KTTCCPKRAL PAAPAARVRT RVFIGFKRKT LEKMCPRLCL DISMDNVFKI
     SNNHQTLNVC FSRASPPQRH STSCNLEKET TSYLFGKMSF YLQGNVPLSA T
//
DBGET integrated database retrieval system