ID A0A3B3IL24_ORYLA Unreviewed; 413 AA.
AC A0A3B3IL24;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE SubName: Full=Cleavage and polyadenylation specific factor 1 {ECO:0000313|Ensembl:ENSORLP00000044883.1};
GN Name=cpsf1 {ECO:0000313|Ensembl:ENSORLP00000044883.1};
OS Oryzias latipes (Japanese rice fish) (Japanese killifish).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae;
OC Oryzias.
OX NCBI_TaxID=8090 {ECO:0000313|Ensembl:ENSORLP00000044883.1, ECO:0000313|Proteomes:UP000001038};
RN [1] {ECO:0000313|Ensembl:ENSORLP00000044883.1, ECO:0000313|Proteomes:UP000001038}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000044883.1,
RC ECO:0000313|Proteomes:UP000001038};
RX PubMed=17554307; DOI=10.1038/nature05846;
RA Kasahara M., Naruse K., Sasaki S., Nakatani Y., Qu W., Ahsan B., Yamada T.,
RA Nagayasu Y., Doi K., Kasai Y., Jindo T., Kobayashi D., Shimada A.,
RA Toyoda A., Kuroki Y., Fujiyama A., Sasaki T., Shimizu A., Asakawa S.,
RA Shimizu N., Hashimoto S., Yang J., Lee Y., Matsushima K., Sugano S.,
RA Sakaizumi M., Narita T., Ohishi K., Haga S., Ohta F., Nomoto H., Nogata K.,
RA Morishita T., Endo T., Shin-I T., Takeda H., Morishita S., Kohara Y.;
RT "The medaka draft genome and insights into vertebrate genome evolution.";
RL Nature 447:714-719(2007).
RN [2] {ECO:0000313|Ensembl:ENSORLP00000044883.1}
RP IDENTIFICATION.
RC STRAIN=Hd-rR {ECO:0000313|Ensembl:ENSORLP00000044883.1};
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3B3IL24; -.
DR Ensembl; ENSORLT00000045040.1; ENSORLP00000044883.1; ENSORLG00000013544.2.
DR GeneTree; ENSGT00950000183151; -.
DR Proteomes; UP000001038; Chromosome 11.
DR Bgee; ENSORLG00000013544; Expressed in testis and 14 other cell types or tissues.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR10644:SF2; CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1; 1.
DR PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR Pfam; PF10433; MMS1_N; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001038}.
FT DOMAIN 56..286
FT /note="Cleavage/polyadenylation specificity factor A
FT subunit N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10433"
FT REGION 154..177
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 351..413
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 378..393
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 413 AA; 45194 MW; 5BA965815A3192BC CRC64;
MYAVYRQAHT PTAVEFSVYC NFISSREKNL VVAGTSQLFV YRIIHDVEVD EIEVYGSEAQ
SGTQLATFSF EVCDSILNIG PCANASMGEP AFLSEEFQSN PEPDLEIVVC SGYGKNGALS
VLQRSIRPQV VTTFELPGCH DMWTVISGED KKVQKEADAE KKEEQDKTEP PLEDDAKKHG
FLILSREDST MILQTGQEIM ELDTSGFATQ GPTVFAGNIG DNQYIIQVSP MGLRLLEGVK
QLHFIPVDLG SPIVHCSVAD PYVVIMTAEG VVTMFVLKSD TYMGKTHRLA LQKPQISTLS
RVIALCAYRD VSGMFTTENK SSCSSKEDLI LRSNSETETV YQDLSNTGWG HWTAPPHAGE
DVPPSADVAE RSDHDAASSR GPQPQSLQVS FLYGPPQSPA PPRRLTSVSS NAE
//