ID A0A3B3X8Q3_9TELE Unreviewed; 1046 AA.
AC A0A3B3X8Q3;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=RNA polymerase II assembly factor Rtp1 C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Poecilia mexicana.
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Poecilia.
OX NCBI_TaxID=48701 {ECO:0000313|Ensembl:ENSPMEP00000011403.1, ECO:0000313|Proteomes:UP000261480};
RN [1] {ECO:0000313|Ensembl:ENSPMEP00000011403.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the Tango6 family.
CC {ECO:0000256|ARBA:ARBA00005724}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR RefSeq; XP_014848722.1; XM_014993236.1.
DR AlphaFoldDB; A0A3B3X8Q3; -.
DR STRING; 48701.ENSPMEP00000011403; -.
DR Ensembl; ENSPMET00000018527.1; ENSPMEP00000011403.1; ENSPMEG00000013526.1.
DR GeneID; 106921503; -.
DR KEGG; pmei:106921503; -.
DR CTD; 79613; -.
DR OrthoDB; 7790at2759; -.
DR Proteomes; UP000261480; Unplaced.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000357; HEAT.
DR InterPro; IPR019451; Rtp1_C1.
DR InterPro; IPR019414; Rtp1_C2.
DR InterPro; IPR039600; TANGO6/Rtp1.
DR PANTHER; PTHR20959; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER; 1.
DR PANTHER; PTHR20959:SF1; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 HOMOLOG; 1.
DR Pfam; PF02985; HEAT; 1.
DR Pfam; PF10363; RTP1_C1; 1.
DR Pfam; PF10304; RTP1_C2; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
PE 3: Inferred from homology;
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 786..902
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10363"
FT DOMAIN 994..1025
FT /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF10304"
FT REGION 736..789
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 742..781
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1046 AA; 114429 MW; 93580B5CBC0115BA CRC64;
MTSEILSAIN ILTQPLGAAE ASAQTSQQEA LHAALGANRS VLLEQLRSDG SLQRAARLRD
EAKGEADWYG GETDDVTWSF VQECLLLLLA LTRHLTEELK LFQEAPPPSG SLRTPEMAPP
LPPDVLSVSQ QKTVGAALQF VVSLGVCPYL SAGVGVPLGR RSAFGAVVEK LIQRETSPPA
GRRLLTTTRV LLQVAELATL ATMVFSRHLG DVMAALCQLG YEPHREDRRP LSTEECRWCK
EALRNLLGKV YQPIVIKELL VLQGGPKQSG PAGSSRAALG SAPAWLRRLC GQLLSERLMQ
PSGVQAVVRA VLEGGTGGDS DWRKCDSVAR ILAACPQQSA SADGYFRLVC PQILDLLHFR
DKLTAQQFQR VATRAALSMV QERPAFAQQY LLAPLLAPLH RCITASAEEH LHVAVEELDL
TRCVEDVYKI WVVGNSPSPT LLAALQDVLP VIFTLFCFTK QSVSHLRAPC QEILLWFLKL
SETSAALSLL RQLSGLRERR NDVAAAFHFT AGGNGGVRLV CRQTCSDEDE ELYKKLSGEQ
WRLECLVQLL AQLTDSDLAG DFFLDLLQEL TGWAAALDEE LKDEEEVDVA AMTLLEVEQQ
LLGGAERRAE KLTLLQALAV MVESLEQEQL LRKTSQVVDF MVSLLQRACV GLDGAPGVGN
PVESQTLSMG MGLVATLLSA PQISAQDYSC MSKLLRPLEA LSQQHPDVVV QELASNLRAV
IATHGACRPE SLADAARCRG NPGETTENSK AKSEGRSQQT PAGRFPQRPS LPSSSGDHDP
SNKPLSDWLL EACDPDVPTR AVALRVVTRM VQRRHPEAVQ AQQKVLTLFL ENLEHEDSFV
YLSAIQGLAV LADSYPGQIL ERLLQDFQRG PSLPSSKQER SLETRLKVGE VLMRASRAMG
ELAPHLGRPL LSVFLQGTRD PDQSVRASSL SNLGELCQRL DYSLGPLAQE LSSCLTALIK
TEREAEVRRA AVHVIAQLLR GLSDKTTQVL SDVLLDLYRA LKLVVRSDPD PAAVLHAQLA
LEELDLVMRR FVFPEQKLEK KIVVLP
//
