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Database: UniProt
Entry: A0A3B5Q1L3_XIPMA
LinkDB: A0A3B5Q1L3_XIPMA
Original site: A0A3B5Q1L3_XIPMA 
ID   A0A3B5Q1L3_XIPMA        Unreviewed;      1092 AA.
AC   A0A3B5Q1L3;
DT   05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT   05-DEC-2018, sequence version 1.
DT   24-JAN-2024, entry version 23.
DE   SubName: Full=Semaphorin 5B {ECO:0000313|Ensembl:ENSXMAP00000023906.1};
OS   Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC   Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC   Xiphophorus.
OX   NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000023906.1, ECO:0000313|Proteomes:UP000002852};
RN   [1] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA   Walter R., Schartl M., Warren W.;
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000002852}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX   PubMed=23542700; DOI=10.1038/ng.2604;
RA   Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA   Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA   Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA   Postlethwait J.H., Warren W.C.;
RT   "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT   evolutionary adaptation and several complex traits.";
RL   Nat. Genet. 45:567-572(2013).
RN   [3] {ECO:0000313|Ensembl:ENSXMAP00000023906.1}
RP   IDENTIFICATION.
RC   STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000023906.1};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC       feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00352}.
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DR   AlphaFoldDB; A0A3B5Q1L3; -.
DR   Ensembl; ENSXMAT00000040364.1; ENSXMAP00000023906.1; ENSXMAG00000000810.2.
DR   GeneTree; ENSGT00940000156712; -.
DR   Proteomes; UP000002852; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0030215; F:semaphorin receptor binding; IEA:InterPro.
DR   GO; GO:0048468; P:cell development; IEA:UniProt.
DR   GO; GO:0022008; P:neurogenesis; IEA:UniProt.
DR   GO; GO:0009605; P:response to external stimulus; IEA:UniProt.
DR   Gene3D; 3.30.1680.10; ligand-binding face of the semaphorins, domain 2; 1.
DR   Gene3D; 2.20.100.10; Thrombospondin type-1 (TSP1) repeat; 6.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR   InterPro; IPR002165; Plexin_repeat.
DR   InterPro; IPR016201; PSI.
DR   InterPro; IPR001627; Semap_dom.
DR   InterPro; IPR036352; Semap_dom_sf.
DR   InterPro; IPR027231; Semaphorin.
DR   InterPro; IPR000884; TSP1_rpt.
DR   InterPro; IPR036383; TSP1_rpt_sf.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR11036; SEMAPHORIN; 1.
DR   PANTHER; PTHR11036:SF39; SEMAPHORIN-5B; 1.
DR   Pfam; PF01437; PSI; 1.
DR   Pfam; PF01403; Sema; 1.
DR   Pfam; PF00090; TSP_1; 5.
DR   PRINTS; PR01705; TSP1REPEAT.
DR   SMART; SM00423; PSI; 1.
DR   SMART; SM00630; Sema; 1.
DR   SMART; SM00209; TSP1; 5.
DR   SUPFAM; SSF103575; Plexin repeat; 1.
DR   SUPFAM; SSF101912; Sema domain; 1.
DR   SUPFAM; SSF82895; TSP-1 type 1 repeat; 6.
DR   PROSITE; PS51004; SEMA; 1.
DR   PROSITE; PS50092; TSP1; 6.
PE   4: Predicted;
KW   Differentiation {ECO:0000256|ARBA:ARBA00022782};
KW   Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Neurogenesis {ECO:0000256|ARBA:ARBA00022902};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW   Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   SIGNAL          1..31
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           32..1092
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5017450979"
FT   TRANSMEM        970..994
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          58..508
FT                   /note="Sema"
FT                   /evidence="ECO:0000259|PROSITE:PS51004"
FT   REGION          1008..1027
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1071..1092
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1072..1092
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1092 AA;  121942 MW;  5567A3A13E91279E CRC64;
     MTASSQDSNP SFLAGLFLLL FHLLLFPAVC TQNSAVPTSP TTPLFDPLTQ PECTKKEHPK
     VSIQALSPWI SAFSHPSVRD YSQLTLDLTR DELIVGARNY LFRLDLRNLS LIQATEWAPD
     EETRKSCQSK GKTEMECQNY IRVLLVNKTE VMTCGTNAFQ PLCISREVGN ISRVVERVNG
     VARCPYDPRH NSTAVVTESG ELYAATVIDF SGRDPVIYRS LGGMPPLRTA QYNSKWLNEP
     HFISAYDIGL FTFFFLRENA VEHDCGKTVY SRVARVCKND IGGRFLLEDT WTTFMKARLN
     CSRSGEIPFY YNELQSTFYL PEQDLIYGIF TTNVNSIAAS AVCAFNLSAI TQTFNGPFRS
     QENPRSTWLP TPNPIHNFQC GTINDKGPNE GLTERSLQDA QRLYLMNDVV QPESVDPLVM
     QDDVRFSNLV VDIVQGMDTL FHVMYISTEY GTILKALATP NKNLQGCYLE EMELHRTGVR
     EPILSLQILH SDRSLFVGLK DRVLKIPLER CSSYKTETLC LEARDPYCGW DFRQRRCTTL
     EESSNMSQWK QNITVCPLRN QTIDGGFGSW TPWHPCSNED ALDGMSSCLC RSRSCDSPAP
     RCGGKTCEGP TIEVSNCSRN GGWTPWSSWG QCSTTCGTGF ELRQRSCNNP SPRHGGRVCV
     GPTRDERFCN EGVSCPQPIF WTPWASWTKC STECGGGIHS RVRSCENGNT CPGCALEYKA
     CNLEACPEVK RNTPWTPWMP VNVTQGGARQ EQRTRYMCRA HLADPHELQI GRRKVETRFC
     PNDGTVVCDT DSLVEELLKT PVVRTAATSW SSWETWSSCS QSCAKGYRTR RRTCSGPEGK
     SAPVACRGSP VEYQDCNVQA CPVKGAWSCW SPWSQCSVGC GSGHYQRTRS CSSPAPANGG
     DICIGLHTEE ALCNTHTCDG GWMAWSLWSA CDDSGFQTRS RVCGAPGSAP CVGNSTQRRD
     CNEIPAFTSI HLIATGVSCF LGAGLLSFLI YVYCQRFHKP SQESAVIHPT TPNHLNYKGN
     TTPKNEKYTP MEFKTLNKNN LLPDERSNFY PTPLQQTNVY TTTYYPTPLG KFDYQPNSSP
     SPCRTYNNSN NS
//
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