ID A0A3B5Q9C1_XIPMA Unreviewed; 663 AA.
AC A0A3B5Q9C1;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Si:ch73-379j16.2 {ECO:0000313|Ensembl:ENSXMAP00000027497.1};
OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Xiphophorus.
OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000027497.1, ECO:0000313|Proteomes:UP000002852};
RN [1] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA Walter R., Schartl M., Warren W.;
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX PubMed=23542700; DOI=10.1038/ng.2604;
RA Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA Postlethwait J.H., Warren W.C.;
RT "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT evolutionary adaptation and several complex traits.";
RL Nat. Genet. 45:567-572(2013).
RN [3] {ECO:0000313|Ensembl:ENSXMAP00000027497.1}
RP IDENTIFICATION.
RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000027497.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3B5Q9C1; -.
DR Ensembl; ENSXMAT00000034911.1; ENSXMAP00000027497.1; ENSXMAG00000027122.1.
DR GeneTree; ENSGT00940000165118; -.
DR InParanoid; A0A3B5Q9C1; -.
DR OMA; FEESEMY; -.
DR Proteomes; UP000002852; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:InterPro.
DR GO; GO:0005509; F:calcium ion binding; IEA:UniProtKB-UniRule.
DR GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; IEA:InterPro.
DR CDD; cd11304; Cadherin_repeat; 4.
DR Gene3D; 2.60.40.60; Cadherins; 5.
DR InterPro; IPR002126; Cadherin-like_dom.
DR InterPro; IPR015919; Cadherin-like_sf.
DR InterPro; IPR032455; Cadherin_C.
DR InterPro; IPR020894; Cadherin_CS.
DR InterPro; IPR013164; Cadherin_N.
DR PANTHER; PTHR24028; CADHERIN-87A; 1.
DR PANTHER; PTHR24028:SF332; PROTOCADHERIN1-ALPHA-AV3-RELATED; 1.
DR Pfam; PF00028; Cadherin; 3.
DR Pfam; PF08266; Cadherin_2; 1.
DR Pfam; PF16492; Cadherin_C_2; 1.
DR PRINTS; PR00205; CADHERIN.
DR SMART; SM00112; CA; 5.
DR SUPFAM; SSF49313; Cadherin-like; 5.
DR PROSITE; PS00232; CADHERIN_1; 2.
DR PROSITE; PS50268; CADHERIN_2; 5.
PE 4: Predicted;
KW Calcium {ECO:0000256|ARBA:ARBA00022837, ECO:0000256|PROSITE-
KW ProRule:PRU00043}; Cell adhesion {ECO:0000256|ARBA:ARBA00022889};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}; Signal {ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..28
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 29..663
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5017370052"
FT TRANSMEM 551..574
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 27..133
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 157..243
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 244..349
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 350..458
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
FT DOMAIN 458..537
FT /note="Cadherin"
FT /evidence="ECO:0000259|PROSITE:PS50268"
SQ SEQUENCE 663 AA; 73376 MW; FEB6E8F563E516E7 CRC64;
NKLHPPSNDH SWPVFLLHLL LIFAKQAATE LRYSVPEEVK EGTVVGNIAK DLGLEKAHLT
DRRLRIVSES ENTFFSVNTN NGALQVRRKI DREELCYGGG ACLMELKIIV ESPLEMHHVV
VEVTDVNDHS PSFLDKQQQL EILQAATDPD VGGNSILNAK DPDEGNNGEI QYIIAKALQP
KIYETFEINS LTGEIKLKAF LDFEESEIYK IDIEASDKGT PPLTGRCRVV VKIKDVNDNS
PKIDVTSLSN TISEDSKPGT TISLISVKDK DSGVNGKIIS RILNDVPFEL KPSYKENMYS
LVTKEHLDRE KVFLYEILIQ ASDCGNPPLS TVKTFSVQVS DVNDNSPRFE KSPLQFYLSE
NNAAGATVFS VRATDIDMNE NAAISYHIVR VGSRDDVTAF LNINSENGQI AGLKSFDFET
LKTFQFQVVA TDSGTPSLSS NVTVNVFILD QNDNAPVILY PLSSNGSAEG EVTDHSLFGL
DRYTGQIRTL RSFTETDEAE HKLVILVKDN GNVSLSATAT VIVKLVEPKE AFAASDVKSA
ANYDEGNDVT FYLMITLGAV SVLFIISIIV LIAMQCSKST DYSSKYLQET NYDGTLCHSI
QYRSGDKRYM LVGPRMSIGS TIVPGSHANT LVLPDRRRTS EEVRTYLFIH SKFGKKCCVF
LFS
//
