ID A0A3B5QFF4_XIPMA Unreviewed; 327 AA.
AC A0A3B5QFF4;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Paired domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Xiphophorus.
OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000029102.1, ECO:0000313|Proteomes:UP000002852};
RN [1] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA Walter R., Schartl M., Warren W.;
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX PubMed=23542700; DOI=10.1038/ng.2604;
RA Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA Postlethwait J.H., Warren W.C.;
RT "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT evolutionary adaptation and several complex traits.";
RL Nat. Genet. 45:567-572(2013).
RN [3] {ECO:0000313|Ensembl:ENSXMAP00000029102.1}
RP IDENTIFICATION.
RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000029102.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3B5QFF4; -.
DR STRING; 8083.ENSXMAP00000029102; -.
DR Ensembl; ENSXMAT00000030692.1; ENSXMAP00000029102.1; ENSXMAG00000022787.1.
DR GeneTree; ENSGT01100000263576; -.
DR InParanoid; A0A3B5QFF4; -.
DR OMA; CKSHITI; -.
DR Proteomes; UP000002852; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR038717; Tc1-like_DDE_dom.
DR InterPro; IPR047655; Transpos_IS630-like.
DR InterPro; IPR002492; Transposase_Tc1-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; NF033545; transpos_IS630; 1.
DR PANTHER; PTHR23022:SF138; TRANSPOSABLE ELEMENT TC3 TRANSPOSASE; 1.
DR PANTHER; PTHR23022; TRANSPOSABLE ELEMENT-RELATED; 1.
DR Pfam; PF13358; DDE_3; 1.
DR Pfam; PF01498; HTH_Tnp_Tc3_2; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 70..140
FT /note="Transposase Tc1-like"
FT /evidence="ECO:0000259|Pfam:PF01498"
FT DOMAIN 149..299
FT /note="Tc1-like transposase DDE"
FT /evidence="ECO:0000259|Pfam:PF13358"
SQ SEQUENCE 327 AA; 37742 MW; 8BA0B3E658A83C13 CRC64;
MGKSKELSVD LKKRIIDLNK SGKSLGGISK QLQVPRATVQ TIIRKYKVHG TVVSLPRSGR
KRKLSHAAER RLVRMVKSQP RITKKQVCKD LEADGTQVSV STVKRVLHRH GLRGCRARKK
PLLQKRHLKT RLKFAADHMD KDKTFWRKVL WSDETKIELF GHNTQQYVWR RKGEAFNPRN
TMPTVKHGGG SIMFWGCFAA SGTGSLQKVN GIMKKEDYLQ ILQENLKPSA RRLGLGRSWV
FQQDNDPKHT SKVVKEWLNQ ARIKVLEWPS QSPDLNPIEN MWTVLKKQVH ARKPSHLAEL
HQFCQEEWSN IRPEACQELV DGYQKLP
//
