ID A0A3B5R089_XIPMA Unreviewed; 588 AA.
AC A0A3B5R089;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Zinc finger RNA-binding protein-like {ECO:0000313|Ensembl:ENSXMAP00000035906.1};
OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Xiphophorus.
OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000035906.1, ECO:0000313|Proteomes:UP000002852};
RN [1] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA Walter R., Schartl M., Warren W.;
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX PubMed=23542700; DOI=10.1038/ng.2604;
RA Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA Postlethwait J.H., Warren W.C.;
RT "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT evolutionary adaptation and several complex traits.";
RL Nat. Genet. 45:567-572(2013).
RN [3] {ECO:0000313|Ensembl:ENSXMAP00000035906.1}
RP IDENTIFICATION.
RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000035906.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; A0A3B5R089; -.
DR Ensembl; ENSXMAT00000025182.1; ENSXMAP00000035906.1; ENSXMAG00000018784.2.
DR GeneTree; ENSGT00940000162148; -.
DR Proteomes; UP000002852; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 1.10.1410.40; -; 1.
DR Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR InterPro; IPR006561; DZF_dom.
DR InterPro; IPR049402; DZF_dom_C.
DR InterPro; IPR049401; DZF_dom_N.
DR InterPro; IPR003604; Matrin/U1-like-C_Znf_C2H2.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR45762; ZINC FINGER RNA-BINDING PROTEIN; 1.
DR PANTHER; PTHR45762:SF2; ZINC FINGER RNA-BINDING PROTEIN 2; 1.
DR Pfam; PF20965; DZF_C; 1.
DR Pfam; PF07528; DZF_N; 1.
DR Pfam; PF12874; zf-met; 1.
DR SMART; SM00572; DZF; 1.
DR SMART; SM00451; ZnF_U1; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS51703; DZF; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000002852}.
FT DOMAIN 226..588
FT /note="DZF"
FT /evidence="ECO:0000259|PROSITE:PS51703"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 35..55
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 68..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 555..588
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 158..195
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 565..588
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 588 AA; 66088 MW; 5F6F53C5381A3852 CRC64;
TNSTSGKPAA STSVSALVST VSTPVVTPKQ LAVTTTAKTA PPIKKPPASS PAAAPVMTVV
TKEEPVQLSV QKMEPQTEDE RSDQAGGQGD IQPVGHDYVE EVRNEDGKVI RFHCKLCECS
FNDPNAKDMH LKGRRHRLQY KKKVNPELPV EIKPSNRARK LQESKLKKQK QKAVLKRQRE
DEQRWHMEMR RYEEDMYWRR MEEEQMYWGE QRRRMPPPPP PPLMSRPGMP VPPLLNCVRR
PDSADDRHIM AKHSTIYPVE EELQAVQRIV SHSERALKLV SDSLLDKEEP AIPSTVAEGE
NPARLLKGVM RVGILAKGLL LRGDRNVELI LLTAKKPTVS LLKSIAKQLP KELLTFSEDQ
YEVQAHPDEA NIVICSSQEP KMQVTISLTS PLMREDTAAE KDKQAEGKDP PDVLNMKKCL
DNLASLRHAK WFQARANGLQ SCVIVIRVLR DLCQRVPTWG KLPSWLWRFQ PNMKSSASGP
LSPGEAMRRV LECISTGILL PDGPGLMDPC EKEPTDVLES MKLQAREDIT ASTQHALRLL
AFRQIHKVLG MESLPASKAN ARNRKRRRDV SDTGEGEGEG KKDKKEEA
//
