ID A0A3B5R0K1_XIPMA Unreviewed; 1659 AA.
AC A0A3B5R0K1;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=LIM and calponin homology domains-containing protein 1-like {ECO:0000313|Ensembl:ENSXMAP00000036762.1};
OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Xiphophorus.
OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000036762.1, ECO:0000313|Proteomes:UP000002852};
RN [1] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA Walter R., Schartl M., Warren W.;
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX PubMed=23542700; DOI=10.1038/ng.2604;
RA Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA Postlethwait J.H., Warren W.C.;
RT "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT evolutionary adaptation and several complex traits.";
RL Nat. Genet. 45:567-572(2013).
RN [3] {ECO:0000313|Ensembl:ENSXMAP00000036762.1}
RP IDENTIFICATION.
RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000036762.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR Ensembl; ENSXMAT00000023913.1; ENSXMAP00000036762.1; ENSXMAG00000008036.2.
DR GeneTree; ENSGT00950000183159; -.
DR InParanoid; A0A3B5R0K1; -.
DR OMA; DEVGHLP; -.
DR OrthoDB; 6462at2759; -.
DR Proteomes; UP000002852; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd08368; LIM; 1.
DR Gene3D; 1.10.418.10; Calponin-like domain; 1.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 1.
DR InterPro; IPR001715; CH_dom.
DR InterPro; IPR036872; CH_dom_sf.
DR InterPro; IPR031865; DUF4757.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR15551:SF3; LIM AND CALPONIN HOMOLOGY DOMAINS-CONTAINING PROTEIN 1; 1.
DR PANTHER; PTHR15551; LIM DOMAIN ONLY 7; 1.
DR Pfam; PF00307; CH; 1.
DR Pfam; PF15949; DUF4757; 2.
DR Pfam; PF00412; LIM; 1.
DR SMART; SM00033; CH; 1.
DR SMART; SM00132; LIM; 1.
DR SUPFAM; SSF47576; Calponin-homology domain, CH-domain; 1.
DR PROSITE; PS50021; CH; 1.
DR PROSITE; PS00478; LIM_DOMAIN_1; 1.
DR PROSITE; PS50023; LIM_DOMAIN_2; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 10..127
FT /note="Calponin-homology (CH)"
FT /evidence="ECO:0000259|PROSITE:PS50021"
FT DOMAIN 1587..1653
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REGION 152..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 356..435
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 459..524
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 731..770
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 901..920
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1084..1242
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1262..1309
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1335..1382
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1444..1470
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1535..1581
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 991..1018
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 155..174
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 178..218
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..244
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 249..264
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 366..388
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 389..412
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 459..503
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1084..1105
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1106..1143
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1144..1177
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1179..1193
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1335..1350
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1355..1382
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1444..1460
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1535..1571
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1659 AA; 183994 MW; C160B8DB96E60472 CRC64;
MAGPEPSHPE PACLEAQKWI EAVTGKSFGD KDFRSALENG ILLCELLSAI KPGLVKKINR
LPTPIAGLDN LSVFLRGCEE LGLKGSQLFD PGDLQDTSIR ANLKDSDCNR KLKNVLNTVF
WLGKAASGCP SYSGPNLNLK EFEGLLAQMK LESDDGGDSS QKRSVRDSGY DCWDSERSES
LSPPQHTRDN SLDSLDSFGS RSQHSPSPDV VNRGNSDGRC SDSEADAPSR KPDVRKDDML
ARRTASSDSR CPVPFNQFLP NRANASCYIP TPRRKQHPEE GEQRSHLQTI PEQTKRTGFH
QKPPKTVTWA PESQAEKLKQ GEDLEVLEQW RLEKLKKAGI KVLPAAVRYN STAITEEKEA
RSPSPNIILR SENEFLSSHS PACDSSSDGE QDVETRRVPD VHRDDLASRR VHRSPGNSRV
HQFVPPPACT TKDRERWEGI RRASQQTLQQ TEISVKEADC DIITRKDNPS LKEEEDEGEE
GKDKAMPNKQ RDDLARRRGQ SRPLPQRDGP MSFVSSSMSP SDVQKWERLR MTEPSEDRPA
PVCQACLQRT YGISGSAKAG RGHGRVVTFG GLTEIEQPTA AAMSRGEELE SLRRLQSKAT
VAMTTVDLGF RLSEGDRSVV MDGCAASPPP AEHRPWTAEP TPTAAEIDAR FALYEQRAQA
EDEEEEEERI PDLQKDDMMA RRTGAFLKQT AGSADFRRFL PPPGSGWSSR GEIAADAAPP
SNKEVLIGTR AASQQPRIPE ETPHCSLKPA VIRAPTQTEG EPDDSDRDKN ILDLDRDDMV
AQRSGTFQKV AAFRGNQGFN QFLPVPASVR RNISSETAGK QSGNRSKLRA DMDGGSGCVA
MAAELEAPPF KAPSSPTCPG LAGRQVPDAA VINAIGPSSS SSSSLICPPS PPSAHTWRVE
EQVEAGREEE KSEDGKMRRE KKPCWLEDEL PPMMVSRRVA FLLDNESASM GDMANEDEAG
HFPSLSPSRF ERMHQQCNAF VEEEDQWQDD LARWKNRRRS TSQELIKKEE ERKRMEKRMK
GNGVDGNKRK SIKTYKEIVE EKERREAELC EAYRQAATPE EAALVLQRYA LRFTISDATL
DSLKLPRSTN KPNQFLNQTE QEHSQTSGAD DSERLERPNQ QDTDGLTEQE RCGQTEDSHE
KHQPGVNLSS SSAPVALQLK DTNSHSEKFQ SEQLPEPPSH LTDPHDEHKN QPDPEAPQSP
TEPAAAPQPK HKLPSLAPSR PLPLLAAKPY CPPRCSPPEH KHVEVQQLDG LVQLNGDTAE
DFASLLDPLQ ENPAVSSQHT QEVDPPEDSA EQPQPPLTER PAPTSGSAIN SLIAGRNCII
TTTIVTELTK THVEPLHPDV QDDAQDGATE TPAEKENPQP VQSPSSLPEY SPSVSEGLEE
SSVTIETPML NLAKRVNHWV WDPNEERKRL ESWQQEQERL LQEQYQKEQE KLKKEWEKAQ
LEVEEEERKH NEEERRILEE TVAPLSPSAS VQRQLERMAT APFSAEENNN AVVRGNVSLQ
QNGQKIHTGS EDQHASKLHF FQDPGCDEQL PQKQEMWKTS SLDRSPQTNQ MQNVKRSESH
DAVAGNQDVS PSAPQPPSPS RCVSGKRLCS GCSKPLGRGA AMIIDTLGLF FHMQCFKCGV
CKGQLGDATA GTDVRIRNGL LSCYECYIAS RGRGQPTPL
//
