ID A0A3B5RCE8_XIPMA Unreviewed; 263 AA.
AC A0A3B5RCE8;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=Somatomedin-B and thrombospondin type-1 domain-containing protein-like {ECO:0000313|Ensembl:ENSXMAP00000041478.1};
OS Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae;
OC Xiphophorus.
OX NCBI_TaxID=8083 {ECO:0000313|Ensembl:ENSXMAP00000041478.1, ECO:0000313|Proteomes:UP000002852};
RN [1] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RA Walter R., Schartl M., Warren W.;
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000002852}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JP 163 A {ECO:0000313|Proteomes:UP000002852};
RX PubMed=23542700; DOI=10.1038/ng.2604;
RA Schartl M., Walter R.B., Shen Y., Garcia T., Catchen J., Amores A.,
RA Braasch I., Chalopin D., Volff J.N., Lesch K.P., Bisazza A., Minx P.,
RA Hillier L., Wilson R.K., Fuerstenberg S., Boore J., Searle S.,
RA Postlethwait J.H., Warren W.C.;
RT "The genome of the platyfish, Xiphophorus maculatus, provides insights into
RT evolutionary adaptation and several complex traits.";
RL Nat. Genet. 45:567-572(2013).
RN [3] {ECO:0000313|Ensembl:ENSXMAP00000041478.1}
RP IDENTIFICATION.
RC STRAIN=JP 163 A {ECO:0000313|Ensembl:ENSXMAP00000041478.1};
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_005795063.2; XM_005795006.2.
DR AlphaFoldDB; A0A3B5RCE8; -.
DR STRING; 8083.ENSXMAP00000041478; -.
DR Ensembl; ENSXMAT00000021913.1; ENSXMAP00000041478.1; ENSXMAG00000026447.1.
DR GeneID; 102221001; -.
DR KEGG; xma:102221001; -.
DR GeneTree; ENSGT00390000008325; -.
DR InParanoid; A0A3B5RCE8; -.
DR OMA; TRDCCED; -.
DR OrthoDB; 2872519at2759; -.
DR Proteomes; UP000002852; Unassembled WGS sequence.
DR Gene3D; 2.20.100.10; Thrombospondin type-1 (TSP1) repeat; 1.
DR InterPro; IPR039942; SBSPO.
DR InterPro; IPR001212; Somatomedin_B_dom.
DR InterPro; IPR000884; TSP1_rpt.
DR InterPro; IPR036383; TSP1_rpt_sf.
DR InterPro; IPR044004; TSP1_spondin_dom.
DR PANTHER; PTHR20920; RPE-SPONDIN; 1.
DR PANTHER; PTHR20920:SF7; SMB DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01033; Somatomedin_B; 1.
DR Pfam; PF19028; TSP1_spondin; 1.
DR SMART; SM00201; SO; 1.
DR SMART; SM00209; TSP1; 1.
DR SUPFAM; SSF82895; TSP-1 type 1 repeat; 1.
DR PROSITE; PS00524; SMB_1; 1.
DR PROSITE; PS50958; SMB_2; 1.
DR PROSITE; PS50092; TSP1; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Reference proteome {ECO:0000313|Proteomes:UP000002852};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..32
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 33..263
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5017250351"
FT DOMAIN 39..83
FT /note="SMB"
FT /evidence="ECO:0000259|PROSITE:PS50958"
SQ SEQUENCE 263 AA; 29662 MW; 987D0DE1662A6D29 CRC64;
MGAHGWSAVR MGIVVCGYLA FFCSEFVPVT EAGCRERGHQ NCCPSRDNKC FEYTRRKTVC
YCDSYCQKTR DCCEDYQHVC QISAAMDCAV GSWGPWSSCS SPCGVGSKER SRQVTIPPRN
GGTPCPDLRQ RRGCYGNNVI CDNAKEVAKI LPDFFKRNFK DPWRRPHMLM KEEKDSYCVY
LRVKQASAAC KLKLWSAQLV RERLVCAECQ SDAMSNSDRC AGDGMEGIRT FWTAASTPGC
HGSWMWELSS EQCRCPPYSV LFV
//
