ID A0A3B5YZ25_WHEAT Unreviewed; 192 AA.
AC A0A3B5YZ25;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=Cold shock domain protein 2 {ECO:0000313|EnsemblPlants:TraesCS1B02G273100.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS1B02G273100.1};
RN [1] {ECO:0000313|EnsemblPlants:TraesCS1B02G273100.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS1B02G273100.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS1B02G273100.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
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DR AlphaFoldDB; A0A3B5YZ25; -.
DR EnsemblPlants; TraesCS1B02G273100.1; TraesCS1B02G273100.1; TraesCS1B02G273100.
DR Gramene; TraesCAD_scaffold_056426_01G000100.1; TraesCAD_scaffold_056426_01G000100.1; TraesCAD_scaffold_056426_01G000100.
DR Gramene; TraesCLE_scaffold_025839_01G000100.1; TraesCLE_scaffold_025839_01G000100.1; TraesCLE_scaffold_025839_01G000100.
DR Gramene; TraesCS1B02G273100.1; TraesCS1B02G273100.1; TraesCS1B02G273100.
DR Gramene; TraesCS1B03G0761100.2; TraesCS1B03G0761100.2.CDS; TraesCS1B03G0761100.
DR Gramene; TraesPAR_scaffold_007302_01G000100.1; TraesPAR_scaffold_007302_01G000100.1; TraesPAR_scaffold_007302_01G000100.
DR Gramene; TraesROB_scaffold_008409_01G000100.1; TraesROB_scaffold_008409_01G000100.1; TraesROB_scaffold_008409_01G000100.
DR Gramene; TraesWEE_scaffold_007546_01G000100.1; TraesWEE_scaffold_007546_01G000100.1; TraesWEE_scaffold_007546_01G000100.
DR Proteomes; UP000019116; Chromosome 1B.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 2.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR46565; COLD SHOCK DOMAIN PROTEIN 2; 1.
DR PANTHER; PTHR46565:SF25; COLD SHOCK DOMAIN PROTEIN 2; 1.
DR Pfam; PF00313; CSD; 1.
DR Pfam; PF00098; zf-CCHC; 2.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SMART; SM00343; ZnF_C2HC; 2.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
DR PROSITE; PS50158; ZF_CCHC; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00047}; Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Zinc {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00047}.
FT DOMAIN 4..70
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 135..150
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 174..189
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 62..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 192 AA; 18241 MW; AB58C2661DBD1465 CRC64;
MGERLKGTVK WFNVTKGFGF ISPEDGSEDL FVHQSAIKAD GYRSLNENDV VEFEVITGDD
GRTKATDVTA PGGGALAGGS RPSEGGGDRG GRGGGGYGGG GYGGGGGGYG GGGGGYGGGG
GGGRYGGGSG GGRECYKCGE EGHISRDCPQ GGGGGGGGYG GGGGRGGGGG GGGCFSCGES
GHFSRECPNK TN
//
