ID A0A3B5ZP42_WHEAT Unreviewed; 1067 AA.
AC A0A3B5ZP42;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Nuclear pore complex protein {ECO:0000256|RuleBase:RU365072};
GN ORFNames=CFC21_010181 {ECO:0000313|EMBL:KAF6993265.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS1D02G051300.2};
RN [1] {ECO:0000313|EMBL:KAF6993265.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF6993265.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS1D02G051300.2}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS1D02G051300.2};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS1D02G051300.2}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF6993265.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF6993265.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Functions as a component of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBUNIT: Part of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|RuleBase:RU365072}. Nucleus membrane
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SIMILARITY: Belongs to the nucleoporin Nup84/Nup107 family.
CC {ECO:0000256|RuleBase:RU365072}.
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DR EMBL; CM022213; KAF6993265.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B5ZP42; -.
DR EnsemblPlants; TraesCS1D02G051300.2; TraesCS1D02G051300.2; TraesCS1D02G051300.
DR Gramene; TraesCS1D02G051300.2; TraesCS1D02G051300.2; TraesCS1D02G051300.
DR Gramene; TraesCS1D03G0111200.2; TraesCS1D03G0111200.2.CDS; TraesCS1D03G0111200.
DR OMA; EEDMPHE; -.
DR Proteomes; UP000019116; Chromosome 1D.
DR Proteomes; UP000815260; Chromosome 1D.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IEA:UniProtKB-UniRule.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3450.20; -; 1.
DR Gene3D; 1.20.190.50; -; 1.
DR InterPro; IPR007252; Nup84/Nup107.
DR PANTHER; PTHR13003:SF2; NUCLEAR PORE COMPLEX PROTEIN NUP107; 1.
DR PANTHER; PTHR13003; NUP107-RELATED; 1.
DR Pfam; PF04121; Nup84_Nup100; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|RuleBase:RU365072};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nuclear pore complex {ECO:0000256|RuleBase:RU365072};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365072};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Translocation {ECO:0000256|ARBA:ARBA00023010,
KW ECO:0000256|RuleBase:RU365072};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|RuleBase:RU365072}.
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1067 AA; 120798 MW; F8E8447A9B03CCA1 CRC64;
MEVDPSPSPS PPPPPMSTPG YFDPESSRLR EEYRRYRKRL SSSNDSPMLG TSFSRFSEAR
ALHDGSSIPR RPNAGLLLEE VKQEAADYSD IDGLNGPKLL DGGSGRKAAR STLNLVKLED
DMPREGETTF TAFASLLDSA IQGLMPFPDV ILQFERTCRN ASESLRYAAI GKVRMVEDKL
MQQKAQLLLD EAASWSLLWY LYGKANEELP EGLFMSPTTS HQEACRYVAT DLTAQLCLRI
VLWLEGLASE SLDLEKKVRG SHVGSYLPSS GVWHRTQRYL KRKNNDSNIV KHVDFDAPTR
EVAQLLPDDK KQDELLLEDI WTLLRAGRLE EACELCRSAG QSWRAATLCP FGGIDLFPSL
EAMLKNGNSR TLQAIELESG IGRQWRLWKW ASYCASEKIA EHDGGQYEMA VYALQCSNLK
RTLPICTDWE SACWAMAKSW LDVKVDIELS QYQTSRPEEK EFDDDMNGTQ LGPENWPYHV
LDQQPRDIAA LLQKLHSSDL VHETVSRACR EQHRQIEMNL MSGNLAHLLD LLWSWLSSIE
EGQNVLRSRD DSDMIRFGAH IVLVLRYLLS NEMEDEFEEK LVTVGDLIIN MYVRYLFSEG
QEELVGVYAS QLERDVCIDL FVDMMELSLH TMYKLFLSAV EYLPFSSGDV SKACFEEIIE
RVLSRSREIK PHQYNEDFSD VAEQHHLQAL QKAMIIQWLC FTPPSSIPDF EMITGKLLIR
ALMHSNTLFR EFSLISMRRV PELPVGPHKL LAILAEPLKQ KENLFSLEDQ EVSDNLEEFE
DWHEYYSLDA TYRGWLRCEM ENSSVPPEML SAEEKDQAVA AATQTLELAF LLLEREERPW
LNAVETSPFE SSELVFLELH ATAILCLPSG ECMTPDATSC TALTSALYST ISEEDVLHRQ
LKVEVKVSSK DPCCIEVALR CLATEGDGFG LHEANDGGLL AAIMAAGFKG ELNRFQPGVS
MEISRLDAWY SDCHGSVEST AAYIIRGLCR RCCLPETILR SMQASISLSE AGDSLDRCDK
LIELVASSDS GMMHLFSQQQ LQEFLIFERE CFICKMELEE EQRPADG
//
