ID A0A3B6B7T5_WHEAT Unreviewed; 372 AA.
AC A0A3B6B7T5;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=RING-CH-type domain-containing protein {ECO:0000259|SMART:SM00744};
GN ORFNames=CFC21_020093 {ECO:0000313|EMBL:KAF7004926.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS2A02G559700.1};
RN [1] {ECO:0000313|EMBL:KAF7004926.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7004926.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS2A02G559700.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS2A02G559700.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS2A02G559700.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7004926.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7004926.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022214; KAF7004926.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6B7T5; -.
DR PaxDb; 4565-Traes_2AL_A89FC9CDD-2; -.
DR EnsemblPlants; TraesCS2A02G559700.1; TraesCS2A02G559700.1; TraesCS2A02G559700.
DR Gramene; TraesCAD_scaffold_098698_01G000300.1; TraesCAD_scaffold_098698_01G000300.1; TraesCAD_scaffold_098698_01G000300.
DR Gramene; TraesCS2A02G559700.1; TraesCS2A02G559700.1; TraesCS2A02G559700.
DR Gramene; TraesCS2A03G1366100.1; TraesCS2A03G1366100.1.CDS; TraesCS2A03G1366100.
DR Gramene; TraesPAR_scaffold_037406_01G000200.1; TraesPAR_scaffold_037406_01G000200.1; TraesPAR_scaffold_037406_01G000200.
DR Gramene; TraesRN2A0101371200.1; TraesRN2A0101371200.1; TraesRN2A0101371200.
DR Gramene; TraesRN2A0101371300.3; TraesRN2A0101371300.3; TraesRN2A0101371300.
DR Gramene; TraesROB_scaffold_114516_01G000200.1; TraesROB_scaffold_114516_01G000200.1; TraesROB_scaffold_114516_01G000200.
DR Gramene; TraesWEE_scaffold_152691_01G000200.1; TraesWEE_scaffold_152691_01G000200.1; TraesWEE_scaffold_152691_01G000200.
DR OMA; AEQKSCI; -.
DR Proteomes; UP000019116; Chromosome 2A.
DR Proteomes; UP000815260; Chromosome 2A.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011016; Znf_RING-CH.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46214:SF12; RING_FYVE_PHD ZINC FINGER SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46214; ZINC FINGER, RING-CH-TYPE; 1.
DR Pfam; PF12906; RINGv; 1.
DR SMART; SM00744; RINGv; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 286..304
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 311..332
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 344..362
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 131..172
FT /note="RING-CH-type"
FT /evidence="ECO:0000259|SMART:SM00744"
FT REGION 1..47
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 83..106
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 92..106
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 372 AA; 40110 MW; C5B1BE9C4152A943 CRC64;
MGVEEQAVQQ PDGGGGKPDA ASAKPPPPEH GQQTPPSNPR ASTCSTDKDD DGHAICRVCQ
CTEPDLTGAS ALGFLGIVPP SPHPSCLKDP GNDATKNPTT KDASNAPTFL EFIGPEGEIF
KCATDIESGH FRPQDAIVNL GCSCKNELAL AHYACALKWF ISHGSTVCEI CSDAATNVRP
QDYNMVLASL KDYQALRERT STGGLSYLHY RAEASVDPVA LAAVRRQRLC EISSWFNPHN
AHFVFSHSQR HSSYNEEVPV SPSNNSADYS VSAWGPAHGG PSVGSTGAFV AIALAFVILA
WFVAPHVGKR AAAILLHMLL GGLCSLTIII SLRFVFPRIQ FGSMRYWGIL FVSWFLVFGV
WASRTRTIRR NS
//
