ID A0A3B6DBJ8_WHEAT Unreviewed; 226 AA.
AC A0A3B6DBJ8;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=isopentenyl-diphosphate Delta-isomerase {ECO:0000256|ARBA:ARBA00012057};
DE EC=5.3.3.2 {ECO:0000256|ARBA:ARBA00012057};
GN ORFNames=CFC21_029243 {ECO:0000313|EMBL:KAF7015384.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS2D02G220000.1};
RN [1] {ECO:0000313|EMBL:KAF7015384.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7015384.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS2D02G220000.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS2D02G220000.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS2D02G220000.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7015384.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7015384.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Isoprenoid biosynthesis; dimethylallyl diphosphate
CC biosynthesis; dimethylallyl diphosphate from isopentenyl diphosphate:
CC step 1/1. {ECO:0000256|ARBA:ARBA00004826}.
CC -!- PATHWAY: Porphyrin-containing compound metabolism.
CC {ECO:0000256|ARBA:ARBA00023444}.
CC -!- SIMILARITY: Belongs to the IPP isomerase type 1 family.
CC {ECO:0000256|ARBA:ARBA00007579}.
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DR EMBL; CM022216; KAF7015384.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6DBJ8; -.
DR SMR; A0A3B6DBJ8; -.
DR STRING; 4565.A0A3B6DBJ8; -.
DR EnsemblPlants; TraesCS2D02G220000.1; TraesCS2D02G220000.1; TraesCS2D02G220000.
DR Gramene; TraesCAD_scaffold_027205_01G000200.1; TraesCAD_scaffold_027205_01G000200.1; TraesCAD_scaffold_027205_01G000200.
DR Gramene; TraesCLE_scaffold_013939_01G000200.1; TraesCLE_scaffold_013939_01G000200.1; TraesCLE_scaffold_013939_01G000200.
DR Gramene; TraesCS2D02G220000.1; TraesCS2D02G220000.1; TraesCS2D02G220000.
DR Gramene; TraesCS2D03G0466100.1; TraesCS2D03G0466100.1.CDS; TraesCS2D03G0466100.
DR Gramene; TraesPAR_scaffold_070222_01G000100.1; TraesPAR_scaffold_070222_01G000100.1; TraesPAR_scaffold_070222_01G000100.
DR Gramene; TraesRN2D0100497600.1; TraesRN2D0100497600.1; TraesRN2D0100497600.
DR Gramene; TraesROB_scaffold_016462_01G000100.1; TraesROB_scaffold_016462_01G000100.1; TraesROB_scaffold_016462_01G000100.
DR Gramene; TraesWEE_scaffold_006797_01G000200.1; TraesWEE_scaffold_006797_01G000200.1; TraesWEE_scaffold_006797_01G000200.
DR OMA; PWGEHEL; -.
DR UniPathway; UPA00059; UER00104.
DR UniPathway; UPA00668; -.
DR Proteomes; UP000019116; Chromosome 2D.
DR Proteomes; UP000815260; Chromosome 2D.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0004452; F:isopentenyl-diphosphate delta-isomerase activity; IBA:GO_Central.
DR GO; GO:0015995; P:chlorophyll biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0050992; P:dimethylallyl diphosphate biosynthetic process; IEA:UniProtKB-UniPathway.
DR GO; GO:0009240; P:isopentenyl diphosphate biosynthetic process; IBA:GO_Central.
DR CDD; cd02885; IPP_Isomerase; 1.
DR Gene3D; 3.90.79.10; Nucleoside Triphosphate Pyrophosphohydrolase; 1.
DR InterPro; IPR011876; IsopentenylPP_isomerase_typ1.
DR InterPro; IPR015797; NUDIX_hydrolase-like_dom_sf.
DR InterPro; IPR000086; NUDIX_hydrolase_dom.
DR NCBIfam; TIGR02150; IPP_isom_1; 1.
DR PANTHER; PTHR10885; ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; 1.
DR PANTHER; PTHR10885:SF18; ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; 1.
DR Pfam; PF00293; NUDIX; 1.
DR PIRSF; PIRSF018427; Isopntndiph_ism; 1.
DR SUPFAM; SSF55811; Nudix; 1.
DR PROSITE; PS51462; NUDIX; 1.
PE 3: Inferred from homology;
KW Chlorophyll biosynthesis {ECO:0000256|ARBA:ARBA00023171};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Isoprene biosynthesis {ECO:0000256|ARBA:ARBA00023229};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 43..195
FT /note="Nudix hydrolase"
FT /evidence="ECO:0000259|PROSITE:PS51462"
SQ SEQUENCE 226 AA; 26226 MW; FD02CD8944A7A7B2 CRC64;
MDEVQRRLMF DDECILVDEQ DNVVGHESKY TCHLMEKIES ENLLHRAFSV FLFNSKHELL
LQQRSATKVT FPLVWTNTCC SHPLYRESEL IQENFLGVRN AAQRKLLDEL GIPAEDVPVD
QFTPLGRMLY KAPSDGKWGE HELDYLLFIV REVKLVPNPD EVADVKYVSR EQLRELIQQA
DAGEGGVKLS PWFRLVVDNF LMGWWEHLEK GTLAEAVDME TIHKLK
//
