ID A0A3B6EIL5_WHEAT Unreviewed; 330 AA.
AC A0A3B6EIL5;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=CFC21_035584 {ECO:0000313|EMBL:KAF7022958.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS3A02G232500.1};
RN [1] {ECO:0000313|EMBL:KAF7022958.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7022958.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS3A02G232500.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS3A02G232500.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS3A02G232500.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7022958.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7022958.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022217; KAF7022958.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6EIL5; -.
DR SMR; A0A3B6EIL5; -.
DR STRING; 4565.A0A3B6EIL5; -.
DR EnsemblPlants; TraesCS3A02G232500.1; TraesCS3A02G232500.1; TraesCS3A02G232500.
DR Gramene; TraesCAD_scaffold_022256_01G000400.1; TraesCAD_scaffold_022256_01G000400.1; TraesCAD_scaffold_022256_01G000400.
DR Gramene; TraesCLE_scaffold_099117_01G000100.1; TraesCLE_scaffold_099117_01G000100.1; TraesCLE_scaffold_099117_01G000100.
DR Gramene; TraesCS3A02G232500.1; TraesCS3A02G232500.1; TraesCS3A02G232500.
DR Gramene; TraesCS3A03G0598500.1; TraesCS3A03G0598500.1.CDS; TraesCS3A03G0598500.
DR Gramene; TraesKAR3A01G0274570.1; cds.TraesKAR3A01G0274570.1; TraesKAR3A01G0274570.
DR Gramene; TraesPAR_scaffold_016517_01G000400.1; TraesPAR_scaffold_016517_01G000400.1; TraesPAR_scaffold_016517_01G000400.
DR Gramene; TraesRN3A0100612700.1; TraesRN3A0100612700.1; TraesRN3A0100612700.
DR Gramene; TraesROB_scaffold_160615_01G000100.1; TraesROB_scaffold_160615_01G000100.1; TraesROB_scaffold_160615_01G000100.
DR Gramene; TraesWEE_scaffold_203025_01G000100.1; TraesWEE_scaffold_203025_01G000100.1; TraesWEE_scaffold_203025_01G000100.
DR OMA; GYLKMAQ; -.
DR OrthoDB; 23913at2759; -.
DR Proteomes; UP000019116; Chromosome 3A.
DR Proteomes; UP000815260; Chromosome 3A.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR GO; GO:0060255; P:regulation of macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0051171; P:regulation of nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR045877; ZFP36-like.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR12547; CCCH ZINC FINGER/TIS11-RELATED; 1.
DR PANTHER; PTHR12547:SF184; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF90229; CCCH zinc finger; 2.
DR PROSITE; PS50103; ZF_C3H1; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 255..283
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 293..321
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 255..283
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 293..321
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 209..244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 119..146
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 330 AA; 35945 MW; DDB2972E1921013C CRC64;
MQEALISPAN ADRLRSAFEL KPYGFGDQRL SSSPRYLPGG DDGLYRCSSP FSPSLGFSSP
SPLATSVSLS PSSSASLVDD GDYDGAAAAD ATGHRLQLAR LALQYQEVAD RYELCLSHLA
EAVDEAAILR RENAELRVAN SDLARRVALL GGKETAAVVI ADEIRRFRLG EHKGASKQRA
PEKLAVLPKS ISVRSNDYLK MNQAAPAAAT PAAYNRKPSS QRAYSGLGAD GGKKGEEQKS
KQDAAGELDV YNQGMFKTEL CNKWEETGAC PYGDQCQFAH GVSELRPVIR HPRYKTEVCR
MVLNGEVCPY GHRCHFRHSL TAAERLLRSR
//
