ID A0A3B6ELC9_WHEAT Unreviewed; 161 AA.
AC A0A3B6ELC9;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=TRASH domain-containing protein {ECO:0000259|SMART:SM00746};
GN ORFNames=CFC21_036687 {ECO:0000313|EMBL:KAF7024325.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS3A02G339200.1};
RN [1] {ECO:0000313|EMBL:KAF7024325.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7024325.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS3A02G339200.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS3A02G339200.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS3A02G339200.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7024325.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7024325.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the eukaryotic ribosomal protein eL24 family.
CC {ECO:0000256|ARBA:ARBA00005647}.
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DR EMBL; CM022217; KAF7024325.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6ELC9; -.
DR SMR; A0A3B6ELC9; -.
DR STRING; 4565.A0A3B6ELC9; -.
DR EnsemblPlants; TraesCS3A02G339200.1; TraesCS3A02G339200.1; TraesCS3A02G339200.
DR Gramene; TraesCAD_scaffold_098339_01G000500.1; TraesCAD_scaffold_098339_01G000500.1; TraesCAD_scaffold_098339_01G000500.
DR Gramene; TraesCLE_scaffold_073995_01G000500.1; TraesCLE_scaffold_073995_01G000500.1; TraesCLE_scaffold_073995_01G000500.
DR Gramene; TraesCS3A02G339200.1; TraesCS3A02G339200.1; TraesCS3A02G339200.
DR Gramene; TraesCS3A03G0811800.1; TraesCS3A03G0811800.1.CDS; TraesCS3A03G0811800.
DR Gramene; TraesPAR_scaffold_123546_01G000500.1; TraesPAR_scaffold_123546_01G000500.1; TraesPAR_scaffold_123546_01G000500.
DR Gramene; TraesROB_scaffold_099749_01G000500.1; TraesROB_scaffold_099749_01G000500.1; TraesROB_scaffold_099749_01G000500.
DR Gramene; TraesWEE_scaffold_074057_01G000200.1; TraesWEE_scaffold_074057_01G000200.1; TraesWEE_scaffold_074057_01G000200.
DR OMA; RYARTDW; -.
DR Proteomes; UP000019116; Chromosome 3A.
DR Proteomes; UP000815260; Chromosome 3A.
DR GO; GO:0022625; C:cytosolic large ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003735; F:structural constituent of ribosome; IBA:GO_Central.
DR GO; GO:0002181; P:cytoplasmic translation; IBA:GO_Central.
DR CDD; cd00472; Ribosomal_L24e_L24; 1.
DR Gene3D; 6.10.250.1270; -; 1.
DR Gene3D; 2.30.170.20; Ribosomal protein L24e; 1.
DR InterPro; IPR038630; L24e/L24_sf.
DR InterPro; IPR000988; Ribosomal_eL24-rel.
DR InterPro; IPR023442; Ribosomal_eL24_CS.
DR InterPro; IPR011017; TRASH_dom.
DR PANTHER; PTHR10792; 60S RIBOSOMAL PROTEIN L24; 1.
DR PANTHER; PTHR10792:SF48; OS05G0486700 PROTEIN; 1.
DR Pfam; PF01246; Ribosomal_L24e; 1.
DR SMART; SM00746; TRASH; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR PROSITE; PS01073; RIBOSOMAL_L24E; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 8..46
FT /note="TRASH"
FT /evidence="ECO:0000259|SMART:SM00746"
FT REGION 64..83
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 118..161
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..80
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 118..135
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 161 AA; 18243 MW; E5F2AD3F42E75165 CRC64;
MVLKTELCRF SGQKIYPGKG IRFIRSDSQV FLFANSKCKR YFHNRLKPAK LCWTAMYRKQ
HKKDIHAEAA KKRRRTTKKP YSRSIVGATL EVIQKKRAEK PEVRDAAREA ALEIKERIKK
TKDEKKAKKA EVTKSQKSQG GKGAVQKGSK GPKIGGGGGK R
//
