ID A0A3B6EQ36_WHEAT Unreviewed; 347 AA.
AC A0A3B6EQ36;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=MSP domain-containing protein {ECO:0000259|PROSITE:PS50202};
GN ORFNames=CFC21_037976 {ECO:0000313|EMBL:KAF7025821.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS3A02G467600.1};
RN [1] {ECO:0000313|EMBL:KAF7025821.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7025821.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS3A02G467600.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS3A02G467600.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS3A02G467600.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7025821.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7025821.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the VAMP-associated protein (VAP) (TC 9.B.17)
CC family. {ECO:0000256|ARBA:ARBA00008932}.
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DR EMBL; CM022217; KAF7025821.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6EQ36; -.
DR EnsemblPlants; TraesCS3A02G467600.1; TraesCS3A02G467600.1; TraesCS3A02G467600.
DR Gramene; TraesCAD_scaffold_052968_01G000100.1; TraesCAD_scaffold_052968_01G000100.1; TraesCAD_scaffold_052968_01G000100.
DR Gramene; TraesCLE_scaffold_084358_01G000100.1; TraesCLE_scaffold_084358_01G000100.1; TraesCLE_scaffold_084358_01G000100.
DR Gramene; TraesCS3A02G467600.1; TraesCS3A02G467600.1; TraesCS3A02G467600.
DR Gramene; TraesCS3A03G1089900.1; TraesCS3A03G1089900.1.CDS; TraesCS3A03G1089900.
DR Gramene; TraesPAR_scaffold_016516_01G000100.1; TraesPAR_scaffold_016516_01G000100.1; TraesPAR_scaffold_016516_01G000100.
DR Gramene; TraesWEE_scaffold_066635_01G000100.1; TraesWEE_scaffold_066635_01G000100.1; TraesWEE_scaffold_066635_01G000100.
DR OMA; PIMKEAP; -.
DR Proteomes; UP000019116; Chromosome 3A.
DR Proteomes; UP000815260; Chromosome 3A.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:InterPro.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR000535; MSP_dom.
DR InterPro; IPR008962; PapD-like_sf.
DR InterPro; IPR016763; VAP.
DR PANTHER; PTHR10809:SF148; OS01G0936800 PROTEIN; 1.
DR PANTHER; PTHR10809; VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN; 1.
DR Pfam; PF00635; Motile_Sperm; 1.
DR PIRSF; PIRSF019693; VAMP-associated; 1.
DR SUPFAM; SSF49354; PapD-like; 1.
DR PROSITE; PS50202; MSP; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 324..345
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 5..125
FT /note="MSP"
FT /evidence="ECO:0000259|PROSITE:PS50202"
FT REGION 205..227
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 263..311
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 347 AA; 38580 MW; C0915D2F1665DC37 CRC64;
MGQGVVEIQP RELQFTFELK KQSSCSVHLV NKSDEYVAFK VKTTSPKRYC VRPNIGVILP
RATCDFTVTM QAQRTAPPDM QLKDKFLVQT TVVPPGTSDD DLIPAFFSKE TNAYIEESKL
RVVLVDASRP PVEQLINNVP STDAAVEVPV LKDTPNVQNE VPAMEKKIPA PQEKISAVVP
NIPSPVRESP ILQEVPVLPH EEPAILAESP PPLKDESPPP LKHESPSYIK DTSAVTIEQL
SPLKEETVTS KVSPLEETLP KETVTVTEDV QNLKSKLNNL ESKLEGAEKM IIKLREESRT
TTQERDRLQQ EMVFLKKGTP KSQLGFPLLF VVYVALLGTS LGYLLRL
//
