ID A0A3B6GQ40_WHEAT Unreviewed; 224 AA.
AC A0A3B6GQ40;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=CFC21_046432 {ECO:0000313|EMBL:KAF7035592.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS3D02G129200.1};
RN [1] {ECO:0000313|EMBL:KAF7035592.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7035592.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS3D02G129200.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS3D02G129200.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS3D02G129200.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7035592.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7035592.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022219; KAF7035592.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6GQ40; -.
DR STRING; 4565.A0A3B6GQ40; -.
DR EnsemblPlants; TraesCS3D02G129200.1; TraesCS3D02G129200.1; TraesCS3D02G129200.
DR Gramene; TraesCAD_scaffold_018530_01G000100.1; TraesCAD_scaffold_018530_01G000100.1; TraesCAD_scaffold_018530_01G000100.
DR Gramene; TraesCLE_scaffold_016983_01G000100.1; TraesCLE_scaffold_016983_01G000100.1; TraesCLE_scaffold_016983_01G000100.
DR Gramene; TraesCS3D02G129200.1; TraesCS3D02G129200.1; TraesCS3D02G129200.
DR Gramene; TraesCS3D03G0273200.1; TraesCS3D03G0273200.1.CDS; TraesCS3D03G0273200.
DR Gramene; TraesKAR3D01G0072080.2; cds.TraesKAR3D01G0072080.2; TraesKAR3D01G0072080.
DR Gramene; TraesKAR3D01G0072080.3; cds.TraesKAR3D01G0072080.3; TraesKAR3D01G0072080.
DR Gramene; TraesPAR_scaffold_127607_01G000100.1; TraesPAR_scaffold_127607_01G000100.1; TraesPAR_scaffold_127607_01G000100.
DR Gramene; TraesROB_scaffold_016518_01G000100.1; TraesROB_scaffold_016518_01G000100.1; TraesROB_scaffold_016518_01G000100.
DR Gramene; TraesWEE_scaffold_016467_01G000100.1; TraesWEE_scaffold_016467_01G000100.1; TraesWEE_scaffold_016467_01G000100.
DR OMA; CTYAHAT; -.
DR Proteomes; UP000019116; Chromosome 3D.
DR Proteomes; UP000815260; Chromosome 3D.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003729; F:mRNA binding; IEA:InterPro.
DR GO; GO:0060255; P:regulation of macromolecule metabolic process; IEA:UniProt.
DR GO; GO:0051171; P:regulation of nitrogen compound metabolic process; IEA:UniProt.
DR GO; GO:0080090; P:regulation of primary metabolic process; IEA:UniProt.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR045877; ZFP36-like.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR12547; CCCH ZINC FINGER/TIS11-RELATED; 1.
DR PANTHER; PTHR12547:SF167; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 51..79
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 51..79
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 22..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 154..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 224 AA; 24457 MW; DDF316624EEB33E6 CRC64;
MEGEIAAAPT RRWAENVIVL SSGRPPRSEE AAVVAGQGQH QRTDAPPEKL YYKTRLCDKY
EATGRCVYED GCTFAHGGAE LRPPVPPHAH AVWRRPPDQE HGGRIVYGGG KACHNFRDRG
HFGDKLAFPH AAAPAPPGHA IRITGDQKLL ADERRSATPP AMPPPAPRYA APGPARAFAP
VPAPAARDRL RQMPEEDGGK KPNRLMLMSL RKTSGIYGDW PEQF
//
