ID A0A3B6INR9_WHEAT Unreviewed; 469 AA.
AC A0A3B6INR9;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 19.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=CFC21_057482 {ECO:0000313|EMBL:KAF7048801.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS4B02G153900.3};
RN [1] {ECO:0000313|EMBL:KAF7048801.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7048801.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS4B02G153900.3}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS4B02G153900.3};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS4B02G153900.3}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7048801.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7048801.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM022221; KAF7048801.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6INR9; -.
DR SMR; A0A3B6INR9; -.
DR STRING; 4565.A0A3B6INR9; -.
DR PaxDb; 4565-Traes_4BS_03BCE49FB-1; -.
DR EnsemblPlants; TraesCS4B02G153900.3; TraesCS4B02G153900.3; TraesCS4B02G153900.
DR Gramene; TraesCS4B02G153900.3; TraesCS4B02G153900.3; TraesCS4B02G153900.
DR Gramene; TraesCS4B03G0399300.3; TraesCS4B03G0399300.3.CDS; TraesCS4B03G0399300.
DR OrthoDB; 4825346at2759; -.
DR Proteomes; UP000019116; Chromosome 4B.
DR Proteomes; UP000815260; Chromosome 4B.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0043484; P:regulation of RNA splicing; IBA:GO_Central.
DR CDD; cd12686; RRM1_PTBPH1_PTBPH2; 1.
DR CDD; cd12691; RRM2_PTBPH1_PTBPH2; 1.
DR CDD; cd12690; RRM3_PTBPH1_PTBPH2; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR034792; PTBPH1/PTBPH2_RRM1.
DR InterPro; IPR034793; PTBPH1/PTBPH2_RRM2.
DR InterPro; IPR034794; PTBPH1/PTBPH2_RRM3.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR15592; MATRIN 3/NUCLEAR PROTEIN 220-RELATED; 1.
DR PANTHER; PTHR15592:SF14; POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 1; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF13893; RRM_5; 2.
DR SMART; SM00360; RRM; 2.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 3.
DR PROSITE; PS50102; RRM; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 21..99
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 246..324
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 346..469
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 379..401
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 411..425
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 469 AA; 50413 MW; 6B92EE6842D5F2CF CRC64;
MSSSGGGGAG QQFRYTQTPS KVLHLRNLPW ECTEEELVEL CKPFGRIVNT KSGVGANRNQ
AFVEFTDVNQ AISMVSYFAS SSEPAQIRGK TVYIQYSNRQ EIINNKSPGE TAGNVLLVTI
EGVQASDVTI DVIHLVFSAF GFVHKIATFE KAAGFQALIQ YTDAPTASAA REALDGRSIP
RYLLPDHVVS CHLRISFSAH KDLNIKFQSH RSRDYTNPYL PVNSSAIDST LQPAVGADGR
RVEAEGNVLL ASIENMQYAV SVDVLHTVFS AFGTVQKIAI FEKNGGTQAL IQYPDASTAT
VAKEALEGHC IYDGGYCKIH LSYSRHTDLN VKAHSDKSKD YTIPEGAHQA APQPAGVPPT
TAGWQGNSQA AGPYGPPGVA AQNQNTNGQM PNWNPGNSGY PPATGQYPGH MYSAPPQQYT
ATSGGFSAPP PPPHEMHPSH QMPPAHHGNQ QRPASGAPGT GQPPPYYHH
//
