ID A0A3B6IPG2_WHEAT Unreviewed; 269 AA.
AC A0A3B6IPG2;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=GATA transcription factor {ECO:0008006|Google:ProtNLM};
GN ORFNames=CFC21_056613 {ECO:0000313|EMBL:KAF7047724.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS4B02G065300.1};
RN [1] {ECO:0000313|EMBL:KAF7047724.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7047724.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS4B02G065300.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS4B02G065300.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS4B02G065300.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7047724.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7047724.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcriptional activator that specifically binds 5'-GATA-3'
CC or 5'-GAT-3' motifs within gene promoters.
CC {ECO:0000256|ARBA:ARBA00002206}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00357}.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class C
CC subfamily. {ECO:0000256|ARBA:ARBA00007722}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM022221; KAF7047724.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6IPG2; -.
DR SMR; A0A3B6IPG2; -.
DR STRING; 4565.A0A3B6IPG2; -.
DR PaxDb; 4565-Traes_4BS_ACD70539F-1; -.
DR EnsemblPlants; TraesCS4B02G065300.1; TraesCS4B02G065300.1; TraesCS4B02G065300.
DR Gramene; TraesCAD_scaffold_086659_01G000100.1; TraesCAD_scaffold_086659_01G000100.1; TraesCAD_scaffold_086659_01G000100.
DR Gramene; TraesCLE_scaffold_046009_01G000300.1; TraesCLE_scaffold_046009_01G000300.1; TraesCLE_scaffold_046009_01G000300.
DR Gramene; TraesCS4B02G065300.1; TraesCS4B02G065300.1; TraesCS4B02G065300.
DR Gramene; TraesCS4B03G0142300.1; TraesCS4B03G0142300.1.CDS; TraesCS4B03G0142300.
DR Gramene; TraesKAR4B01G0039160.1; cds.TraesKAR4B01G0039160.1; TraesKAR4B01G0039160.
DR Gramene; TraesPAR_scaffold_100548_01G000100.1; TraesPAR_scaffold_100548_01G000100.1; TraesPAR_scaffold_100548_01G000100.
DR Gramene; TraesRN4B0100148500.1; TraesRN4B0100148500.1; TraesRN4B0100148500.
DR Gramene; TraesWEE_scaffold_027776_01G000300.1; TraesWEE_scaffold_027776_01G000300.1; TraesWEE_scaffold_027776_01G000300.
DR OMA; AMRMQRK; -.
DR OrthoDB; 3616433at2759; -.
DR Proteomes; UP000019116; Chromosome 4B.
DR Proteomes; UP000815260; Chromosome 4B.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR InterPro; IPR010402; CCT_domain.
DR InterPro; IPR045280; TIFY-like.
DR InterPro; IPR010399; Tify_dom.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR46125:SF13; GATA TRANSCRIPTION FACTOR 19; 1.
DR PANTHER; PTHR46125; GATA TRANSCRIPTION FACTOR 28; 1.
DR Pfam; PF06203; CCT; 1.
DR Pfam; PF00320; GATA; 1.
DR Pfam; PF06200; tify; 1.
DR SMART; SM00979; TIFY; 1.
DR SMART; SM00401; ZnF_GATA; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR PROSITE; PS51017; CCT; 1.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS51320; TIFY; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|ARBA:ARBA00023159};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00357};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 32..67
FT /note="Tify"
FT /evidence="ECO:0000259|PROSITE:PS51320"
FT DOMAIN 94..136
FT /note="CCT"
FT /evidence="ECO:0000259|PROSITE:PS51017"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 240..269
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 240..263
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 269 AA; 28710 MW; BDA2A140F8962199 CRC64;
MAAEPAADGQ DPPLADAASG DDDAAAAADA LLSAASEQLT LVYQGEVYVF DPVPPQKVQA
ALLVLGGCEV PPGLVSMAGP TAYAEKSTTV AAKRVASLMR FREKRKERCF DKKIRYGVRK
EVAQKMKRRK GQFAGRADFG DAASSSAACV SAVDGEDDHF RESHCQNCGV SSRLTPAMRR
GPAGPRTLCN ACGLMWANKG TLRSPLNAPK MTVQHPVNPS KMESVDDDKA IVCAERNHTA
VKMDSEMSPE QEQKPELRPA TEGDTMADS
//
