ID A0A3B6LTD4_WHEAT Unreviewed; 161 AA.
AC A0A3B6LTD4;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=H15 domain-containing protein {ECO:0000259|PROSITE:PS51504};
GN ORFNames=CFC21_073560 {ECO:0000313|EMBL:KAF7067709.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS5B02G395400.1};
RN [1] {ECO:0000313|EMBL:KAF7067709.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7067709.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS5B02G395400.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS5B02G395400.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS5B02G395400.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7067709.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7067709.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM022224; KAF7067709.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6LTD4; -.
DR STRING; 4565.A0A3B6LTD4; -.
DR PaxDb; 4565-Traes_5BL_105100E89-1; -.
DR EnsemblPlants; TraesCS5B02G395400.1; TraesCS5B02G395400.1; TraesCS5B02G395400.
DR Gramene; TraesCAD_scaffold_027320_01G000100.1; TraesCAD_scaffold_027320_01G000100.1; TraesCAD_scaffold_027320_01G000100.
DR Gramene; TraesCLE_scaffold_023218_01G000100.1; TraesCLE_scaffold_023218_01G000100.1; TraesCLE_scaffold_023218_01G000100.
DR Gramene; TraesCS5B02G395400.1; TraesCS5B02G395400.1; TraesCS5B02G395400.
DR Gramene; TraesCS5B03G0983500.1; TraesCS5B03G0983500.1.CDS; TraesCS5B03G0983500.
DR Gramene; TraesKAR5B01G0379260.1; cds.TraesKAR5B01G0379260.1; TraesKAR5B01G0379260.
DR Gramene; TraesPAR_scaffold_020829_01G000100.1; TraesPAR_scaffold_020829_01G000100.1; TraesPAR_scaffold_020829_01G000100.
DR Gramene; TraesRN5B0100955600.1; TraesRN5B0100955600.1; TraesRN5B0100955600.
DR Gramene; TraesROB_scaffold_042772_01G000100.1; TraesROB_scaffold_042772_01G000100.1; TraesROB_scaffold_042772_01G000100.
DR Gramene; TraesWEE_scaffold_022728_01G000100.1; TraesWEE_scaffold_022728_01G000100.1; TraesWEE_scaffold_022728_01G000100.
DR OMA; THLEYPE; -.
DR OrthoDB; 1221086at2759; -.
DR Proteomes; UP000019116; Chromosome 5B.
DR Proteomes; UP000815260; Chromosome 5B.
DR GO; GO:0005730; C:nucleolus; IBA:GO_Central.
DR GO; GO:0000786; C:nucleosome; IEA:InterPro.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003690; F:double-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0031492; F:nucleosomal DNA binding; IBA:GO_Central.
DR GO; GO:0030261; P:chromosome condensation; IBA:GO_Central.
DR GO; GO:0045910; P:negative regulation of DNA recombination; IBA:GO_Central.
DR GO; GO:0006334; P:nucleosome assembly; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR017956; AT_hook_DNA-bd_motif.
DR InterPro; IPR005818; Histone_H1/H5_H15.
DR InterPro; IPR000637; HMGI/Y_DNA-bd_CS.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR11467; HISTONE H1; 1.
DR PANTHER; PTHR11467:SF162; HMG-Y-RELATED PROTEIN A; 1.
DR Pfam; PF00538; Linker_histone; 1.
DR PRINTS; PR00929; ATHOOK.
DR SMART; SM00384; AT_hook; 3.
DR SMART; SM00526; H15; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51504; H15; 1.
DR PROSITE; PS00354; HMGI_Y; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 11..81
FT /note="H15"
FT /evidence="ECO:0000259|PROSITE:PS51504"
FT REGION 73..161
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 83..97
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 112..126
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 161 AA; 17122 MW; 865A051C0586817E CRC64;
MAAEEAAKPA TLPSYPEMIL AAIAALNDKN GSNKSAISKH IEGKYGDLPK EHAALLTAHL
VRMKETGQLL FLKNNYFRTD APDAPPKRGR GRPRKPIDPN APPKPASPRP RGRPTKPKDP
EAEAANPPKK AKTAPTPAVD GSAKRGRGRP PKARPAEPAA A
//
