ID A0A3B6MNL0_WHEAT Unreviewed; 1039 AA.
AC A0A3B6MNL0;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Structural maintenance of chromosomes protein 6 {ECO:0000313|EnsemblPlants:TraesCS5D02G166500.1};
GN ORFNames=CFC21_077119 {ECO:0000313|EMBL:KAF7071888.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS5D02G166500.1};
RN [1] {ECO:0000313|EMBL:KAF7071888.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7071888.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS5D02G166500.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS5D02G166500.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS5D02G166500.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7071888.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7071888.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the SMC family. SMC6 subfamily.
CC {ECO:0000256|ARBA:ARBA00006793}.
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DR EMBL; CM022225; KAF7071888.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6MNL0; -.
DR SMR; A0A3B6MNL0; -.
DR STRING; 4565.A0A3B6MNL0; -.
DR PaxDb; 4565-Traes_5DL_67A6B8CEB-2; -.
DR EnsemblPlants; TraesCS5D02G166500.1; TraesCS5D02G166500.1; TraesCS5D02G166500.
DR Gramene; TraesCAD_scaffold_018168_01G000100.1; TraesCAD_scaffold_018168_01G000100.1; TraesCAD_scaffold_018168_01G000100.
DR Gramene; TraesCLE_scaffold_081460_01G000100.1; TraesCLE_scaffold_081460_01G000100.1; TraesCLE_scaffold_081460_01G000100.
DR Gramene; TraesCS5D02G166500.1; TraesCS5D02G166500.1; TraesCS5D02G166500.
DR Gramene; TraesCS5D03G0405900.1; TraesCS5D03G0405900.1.CDS; TraesCS5D03G0405900.
DR Gramene; TraesKAR5D01G0188160.1; cds.TraesKAR5D01G0188160.1; TraesKAR5D01G0188160.
DR Gramene; TraesPAR_scaffold_019137_01G000100.1; TraesPAR_scaffold_019137_01G000100.1; TraesPAR_scaffold_019137_01G000100.
DR Gramene; TraesROB_scaffold_066181_01G000100.1; TraesROB_scaffold_066181_01G000100.1; TraesROB_scaffold_066181_01G000100.
DR Gramene; TraesWEE_scaffold_086000_01G000100.1; TraesWEE_scaffold_086000_01G000100.1; TraesWEE_scaffold_086000_01G000100.
DR OMA; FMCHRSL; -.
DR OrthoDB; 78166at2759; -.
DR Proteomes; UP000019116; Chromosome 5D.
DR Proteomes; UP000815260; Chromosome 5D.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0035861; C:site of double-strand break; IBA:GO_Central.
DR GO; GO:0030915; C:Smc5-Smc6 complex; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003684; F:damaged DNA binding; IBA:GO_Central.
DR GO; GO:0003697; F:single-stranded DNA binding; IBA:GO_Central.
DR GO; GO:0000724; P:double-strand break repair via homologous recombination; IBA:GO_Central.
DR Gene3D; 1.10.287.1490; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038729; Rad50/SbcC_AAA.
DR PANTHER; PTHR19306; STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6; 1.
DR PANTHER; PTHR19306:SF6; STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6; 1.
DR Pfam; PF13476; AAA_23; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Chromosome {ECO:0000256|ARBA:ARBA00022454};
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 7..259
FT /note="Rad50/SbcC-type AAA"
FT /evidence="ECO:0000259|Pfam:PF13476"
FT COILED 167..385
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 623..671
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 697..809
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1039 AA; 119354 MW; 8A279877508589F8 CRC64;
MAGTISRIRL ENFMCHSSLH IELGEHVNFI TGQNGSGKSA ILTALCIAFG CRAKNTQRAA
TIKDFIKTGC SYAAIAVDIN NQGEDSFKPD VYGNLIKLER RITESSSSTI LKDQHGRKVA
NRKDDLNEII EHFNIDVENP CVIMSQDKSR EFLHSGNDKD KFKFFFKATL LQQVNELLET
IRDQLNNADS VVQELEKSIK PVMRELDELR EKIKNMEHIE EIAHDIDNLK KKLAWSWVYE
VDQQIEEQTV RLQKLKERIP ACQERIDRNT VVIDDLKKEL TEKEELVRSL GDKTHEVNNM
KKSMEDNIAE VVKLKIELEA EHERGTRTLE KMNGRLKQMQ AQLRDFQMQH MQFTQAEASQ
IEEDMQNIQR DIDYLDSNVT RLREEEKEFS EELSGIQKSI SDIAKEIAES DKRILQLKSH
MDGLQQRQSN TVTAFGGQKV LKLLQLIESN HGRFKSPPIG PIGAHLQLAS ESWSVAVDCA
CGGLLDAFIV SCHKDLQVLR ECAGRVYYNN LRIIVYDFTR QRLIIPDGSL PTTEHPTVLS
VIQSENHTVL NVLVDQGHAE RQVLVRDYEV GKSVAFDHRM RNIKEVYTSD GFRMFSRGSV
QTILPPNKRP RPERWCSSPA EKIAELKNEA DDIQRTISEK NAQRRKLVND RSNLEQKIAN
LKRKREPEER HLMNKKVQLE DAKRATAENN RHAAVDTTEL EEDIKEEKNN IEQKELSLQK
TNVKLSAALR EVNDRRMAFK TFMDSVNEER LHFSSANDEL DLVKRKIDAA QQEKTHYEGV
MTTKVLPDIK TAEAEYADLQ QHRQEYFKKA SIICSESDME ALSHVAGSTP EQLSAKINRL
KQRFDQESRR YAESIDDLRA LHDKKERKIL RKQQLYAGFR VKLNSCQKAL DLRWKKFQRN
AGLLKRQLTW LFNEHLGKKG ISGFINVDYK SKVLSVELTM PQDASRDTVR DTRGLSGGER
SFSTLCFTLA LHGMTEAPFR AMDEFDVFMD AVSRKISLDT LVDFAVAHGS QWVFITPHDI
SMVKPGDRVK KQQMAAPRG
//
