ID A0A3B6MPX0_WHEAT Unreviewed; 479 AA.
AC A0A3B6MPX0;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=GATA-type domain-containing protein {ECO:0000259|PROSITE:PS50114};
GN ORFNames=CFC21_076754 {ECO:0000313|EMBL:KAF7071442.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS5D02G129900.1};
RN [1] {ECO:0000313|EMBL:KAF7071442.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7071442.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS5D02G129900.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS5D02G129900.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS5D02G129900.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7071442.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7071442.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the type IV zinc-finger family. Class A
CC subfamily. {ECO:0000256|ARBA:ARBA00005694}.
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DR EMBL; CM022225; KAF7071442.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6MPX0; -.
DR EnsemblPlants; TraesCS5D02G129900.1; TraesCS5D02G129900.1; TraesCS5D02G129900.
DR Gramene; TraesCAD_scaffold_005917_01G000100.1; TraesCAD_scaffold_005917_01G000100.1; TraesCAD_scaffold_005917_01G000100.
DR Gramene; TraesCLE_scaffold_004695_01G000200.1; TraesCLE_scaffold_004695_01G000200.1; TraesCLE_scaffold_004695_01G000200.
DR Gramene; TraesCS5D02G129900.1; TraesCS5D02G129900.1; TraesCS5D02G129900.
DR Gramene; TraesCS5D03G0328000.2; TraesCS5D03G0328000.2.CDS; TraesCS5D03G0328000.
DR Gramene; TraesPAR_scaffold_002201_01G000100.1; TraesPAR_scaffold_002201_01G000100.1; TraesPAR_scaffold_002201_01G000100.
DR Gramene; TraesROB_scaffold_042724_01G000200.1; TraesROB_scaffold_042724_01G000200.1; TraesROB_scaffold_042724_01G000200.
DR Proteomes; UP000019116; Chromosome 5D.
DR Proteomes; UP000815260; Chromosome 5D.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00202; ZnF_GATA; 3.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 3.
DR InterPro; IPR000679; Znf_GATA.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR45658; GATA TRANSCRIPTION FACTOR; 1.
DR PANTHER; PTHR45658:SF130; GATA TRANSCRIPTION FACTOR 14; 1.
DR Pfam; PF00320; GATA; 3.
DR SMART; SM00401; ZnF_GATA; 3.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 3.
DR PROSITE; PS00344; GATA_ZN_FINGER_1; 1.
DR PROSITE; PS50114; GATA_ZN_FINGER_2; 3.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00094};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00094}.
FT DOMAIN 135..174
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT DOMAIN 227..263
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT DOMAIN 331..367
FT /note="GATA-type"
FT /evidence="ECO:0000259|PROSITE:PS50114"
FT REGION 1..46
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 100..135
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 279..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 400..463
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 422..437
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 479 AA; 51973 MW; 6A394758AB57FED3 CRC64;
MATAEEGEGG EPPGLGRGRC PRFRRSEATR DMAGGGGVGG KEDGGTEPPL LFVLALPATA
LPAVVSRLEA AVPRKARSYL PRNVPSAWWS LRIPFIQPLP PAGDPANEEE GRRFPRPQRV
QVAPSLDPGT ADKPPKRLKR CLHCKAVETP QRRSGPMGRG TLCNACGVWY SKNGTLPEHR
PVASPIVDSP LENPIWEPEV PGAIYLVRKS ATERMPPRTE AAPAPAPRPG TSCLHCGSSE
PPLWIEGSMG RREVCTACGM RYKKGRLLPE CRPAECSVTD SRQESPVINS PPESPIWEPE
APSSVHLPRK PSKKKKRRRP RSEAPSAPWP ANKGKRCQHC GSSETPQWRE GPKGRATLCN
ACGVRYRQGR LLPEYRPVAS PTFVPTKHAN THRKVLQLHR TRQSNDEHPS PLPADSVTNL
PPIRNELPTT STAGLASEDP TDAPGYTDNP INVPSSLDSL LLDGPSAPLI VESEDFAIS
//
