ID A0A3B6MQ16_WHEAT Unreviewed; 299 AA.
AC A0A3B6MQ16;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Homeobox-leucine zipper protein {ECO:0000256|RuleBase:RU369038};
DE AltName: Full=HD-ZIP protein {ECO:0000256|RuleBase:RU369038};
DE AltName: Full=Homeodomain transcription factor {ECO:0000256|RuleBase:RU369038};
GN ORFNames=CFC21_077517 {ECO:0000313|EMBL:KAF7072375.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS5D02G205000.1};
RN [1] {ECO:0000313|EMBL:KAF7072375.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7072375.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS5D02G205000.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS5D02G205000.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS5D02G205000.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7072375.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7072375.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Transcription factor. {ECO:0000256|RuleBase:RU369038}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class I subfamily.
CC {ECO:0000256|ARBA:ARBA00025748, ECO:0000256|RuleBase:RU369038}.
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DR EMBL; CM022225; KAF7072375.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6MQ16; -.
DR EnsemblPlants; TraesCS5D02G205000.1; TraesCS5D02G205000.1; TraesCS5D02G205000.
DR Gramene; TraesCAD_scaffold_068124_01G000100.1; TraesCAD_scaffold_068124_01G000100.1; TraesCAD_scaffold_068124_01G000100.
DR Gramene; TraesCLE_scaffold_093903_01G000300.1; TraesCLE_scaffold_093903_01G000300.1; TraesCLE_scaffold_093903_01G000300.
DR Gramene; TraesCS5D02G205000.1; TraesCS5D02G205000.1; TraesCS5D02G205000.
DR Gramene; TraesCS5D03G0483200.1; TraesCS5D03G0483200.1.CDS; TraesCS5D03G0483200.
DR Gramene; TraesKAR5D01G0224710.1; cds.TraesKAR5D01G0224710.1; TraesKAR5D01G0224710.
DR Gramene; TraesPAR_scaffold_064220_01G000100.1; TraesPAR_scaffold_064220_01G000100.1; TraesPAR_scaffold_064220_01G000100.
DR Gramene; TraesRN5D0100504700.1; TraesRN5D0100504700.1; TraesRN5D0100504700.
DR Gramene; TraesROB_scaffold_143187_01G000100.1; TraesROB_scaffold_143187_01G000100.1; TraesROB_scaffold_143187_01G000100.
DR Gramene; TraesWEE_scaffold_355596_01G000100.1; TraesWEE_scaffold_355596_01G000100.1; TraesWEE_scaffold_355596_01G000100.
DR OMA; EYENEMC; -.
DR OrthoDB; 414754at2759; -.
DR Proteomes; UP000019116; Chromosome 5D.
DR Proteomes; UP000815260; Chromosome 5D.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:UniProtKB-UniRule.
DR GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
DR GO; GO:0045893; P:positive regulation of DNA-templated transcription; IBA:GO_Central.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR045224; HDZip_class_I_plant.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR003106; Leu_zip_homeo.
DR PANTHER; PTHR24326; HOMEOBOX-LEUCINE ZIPPER PROTEIN; 1.
DR PANTHER; PTHR24326:SF525; HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX25; 1.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Transcription {ECO:0000256|RuleBase:RU369038};
KW Transcription regulation {ECO:0000256|RuleBase:RU369038}.
FT DOMAIN 74..135
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 76..136
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 172..194
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 228..247
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 127..154
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 299 AA; 32637 MW; 69046F59100E246A CRC64;
MESGRLIFGS AAPCRAAGAG GGQMMLFGGS GSFLGGSPVV VGVEDGRRKR PFLTTVDEEL
QLDEEMYGYY GLDEHAPERK RRLTAEQVRA LERSFEEEKR KLEPERKSEL ARRLGIAPRQ
VAVWFQNRRA RWKAKQLEQD FDALRAAHDE LLAGRDALLA DNHRLRSQVT SLTEKLQAKE
SSKPEEPTAV SGTADAGVPA VELKDGYAAC DGAAGLLAGF AGGANDSPES NSYLADARSP
PSSSDDDCAG AVRGELNSCA FFLPEYAMLD VAAAERGSVQ QGEEEEEEAQ RKYWAWFWS
//
