ID A0A3B6MW55_WHEAT Unreviewed; 428 AA.
AC A0A3B6MW55;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Histone-binding protein RBBP4 N-terminal domain-containing protein {ECO:0000259|Pfam:PF12265};
GN ORFNames=CFC21_079366 {ECO:0000313|EMBL:KAF7074509.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS5D02G385600.1};
RN [1] {ECO:0000313|EMBL:KAF7074509.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7074509.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS5D02G385600.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS5D02G385600.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS5D02G385600.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7074509.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7074509.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the WD repeat RBAP46/RBAP48/MSI1 family.
CC {ECO:0000256|ARBA:ARBA00009341}.
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DR EMBL; CM022225; KAF7074509.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6MW55; -.
DR SMR; A0A3B6MW55; -.
DR STRING; 4565.A0A3B6MW55; -.
DR EnsemblPlants; TraesCS5D02G385600.1; TraesCS5D02G385600.1; TraesCS5D02G385600.
DR Gramene; TraesCS5D02G385600.1; TraesCS5D02G385600.1; TraesCS5D02G385600.
DR Gramene; TraesCS5D03G0863400.1; TraesCS5D03G0863400.1.CDS; TraesCS5D03G0863400.
DR Gramene; TraesKAR5D01G0330780.1; cds.TraesKAR5D01G0330780.1; TraesKAR5D01G0330780.
DR Gramene; TraesWEE_scaffold_137040_01G000200.1; TraesWEE_scaffold_137040_01G000200.1; TraesWEE_scaffold_137040_01G000200.
DR OMA; PHEEGCL; -.
DR OrthoDB; 5472072at2759; -.
DR Proteomes; UP000019116; Chromosome 5D.
DR Proteomes; UP000815260; Chromosome 5D.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0042393; F:histone binding; IBA:GO_Central.
DR GO; GO:0006338; P:chromatin remodeling; IBA:GO_Central.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR022052; Histone-bd_RBBP4_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR22850:SF214; HISTONE-BINDING PROTEIN MSI1; 1.
DR PANTHER; PTHR22850; WD40 REPEAT FAMILY; 1.
DR Pfam; PF12265; CAF1C_H4-bd; 1.
DR Pfam; PF00400; WD40; 5.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00320; WD40; 6.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 4.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT DOMAIN 23..92
FT /note="Histone-binding protein RBBP4 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF12265"
FT REPEAT 178..220
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 273..308
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 317..359
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 374..408
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 428 AA; 48322 MW; 39853195E9CE777F CRC64;
MPKAGGGDEE EFRAEVEERL INEEYKIWKK NTPFLYDLVI THALEWPSLT VQWLPDRTEP
AGKDHSVQKM VLGTHTSDNE PNYLMLAQVQ LPLDDAEADA RHYDDDHADI GGFGAASGKV
QIVQQINHDG EVNRARYMPQ NSFIIATKTV SAEVYVFDYS KHPSKPPLDG ACNPDLRLKG
HNSEGYGLSW SIFKEGHLLS GSDDAQICLW DITANGKNKT LDAYQIFKFH DGVVEDVAWH
LRHEYLFGSV GDDHHLLIWD MRSPAPTKPV QSVVAHQGEV NCLAFNPFNE WVVATGSTDK
TVKLFDLRKI DTSLHTFDCH KEEVFQVGWS PKNETILASC CLGRRLMVWD LSRIDQEQTP
EDAEDGPPEL LFIHGGHTSK ISDFSWNPCE DWVLASVAED NILQIWQMAE NIYHDEDDLP
SDEPAKAS
//
