ID A0A3B6N219_WHEAT Unreviewed; 251 AA.
AC A0A3B6N219;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=Sigma 54 modulation/S30EA ribosomal protein C-terminal domain-containing protein {ECO:0000259|Pfam:PF16321};
GN ORFNames=CFC21_081277 {ECO:0000313|EMBL:KAF7076660.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS5D02G564800.1};
RN [1] {ECO:0000313|EMBL:KAF7076660.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7076660.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS5D02G564800.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS5D02G564800.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS5D02G564800.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7076660.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7076660.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022225; KAF7076660.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6N219; -.
DR SMR; A0A3B6N219; -.
DR STRING; 4565.A0A3B6N219; -.
DR EnsemblPlants; TraesCS5D02G564800.1; TraesCS5D02G564800.1; TraesCS5D02G564800.
DR Gramene; TraesCAD_scaffold_138292_01G000100.1; TraesCAD_scaffold_138292_01G000100.1; TraesCAD_scaffold_138292_01G000100.
DR Gramene; TraesCLE_scaffold_058482_01G000100.1; TraesCLE_scaffold_058482_01G000100.1; TraesCLE_scaffold_058482_01G000100.
DR Gramene; TraesCS5D02G564800.1; TraesCS5D02G564800.1; TraesCS5D02G564800.
DR Gramene; TraesCS5D03G1212800.1; TraesCS5D03G1212800.1.CDS; TraesCS5D03G1212800.
DR Gramene; TraesPAR_scaffold_077971_01G000100.1; TraesPAR_scaffold_077971_01G000100.1; TraesPAR_scaffold_077971_01G000100.
DR Gramene; TraesRN5D0101251300.1; TraesRN5D0101251300.1; TraesRN5D0101251300.
DR Gramene; TraesROB_scaffold_061489_01G000100.1; TraesROB_scaffold_061489_01G000100.1; TraesROB_scaffold_061489_01G000100.
DR Gramene; TraesWEE_scaffold_081207_01G000100.1; TraesWEE_scaffold_081207_01G000100.1; TraesWEE_scaffold_081207_01G000100.
DR Proteomes; UP000019116; Chromosome 5D.
DR Proteomes; UP000815260; Chromosome 5D.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0043024; F:ribosomal small subunit binding; IBA:GO_Central.
DR GO; GO:0045900; P:negative regulation of translational elongation; IBA:GO_Central.
DR GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR CDD; cd00552; RaiA; 1.
DR Gene3D; 3.30.160.100; Ribosome hibernation promotion factor-like; 1.
DR Gene3D; 3.30.505.50; Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain; 1.
DR InterPro; IPR036567; RHF-like.
DR InterPro; IPR003489; RHF/RaiA.
DR InterPro; IPR032528; Ribosom_S30AE_C.
DR InterPro; IPR038416; Ribosom_S30AE_C_sf.
DR NCBIfam; TIGR00741; yfiA; 1.
DR PANTHER; PTHR33231; 30S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR33231:SF1; 30S RIBOSOMAL PROTEIN; 1.
DR Pfam; PF16321; Ribosom_S30AE_C; 1.
DR Pfam; PF02482; Ribosomal_S30AE; 1.
DR SUPFAM; SSF69754; Ribosome binding protein Y (YfiA homologue); 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 177..228
FT /note="Sigma 54 modulation/S30EA ribosomal protein C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF16321"
FT REGION 1..33
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..25
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 251 AA; 27767 MW; 740D60ACB6ED9E03 CRC64;
MEATAATVWP STSSSVLTPR TRHHATPSSR PLRSGFLGRT LTLAAATHRP SSASAAVSIS
VRAAWDGPLS LARLIMQGRN VKLKEHIEDK VGRAVHNQAH LVREVDVRLS ARGGDLSKGP
KLSRCEVTLF TRRRDVVRAE EEEDSSYASI DAAAAVVKRK LRKIKEKETD VRYLKGVVRT
KVFEMAPLTV DEALEQLENV DHDFYAFRNE QTGEVNIVYK RKEEGFGLII PKQDGHVDKA
TVNAKEHPVA G
//
