ID A0A3B6NW41_WHEAT Unreviewed; 989 AA.
AC A0A3B6NW41;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN ORFNames=CFC21_084813 {ECO:0000313|EMBL:KAF7080802.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS6A02G340600.1};
RN [1] {ECO:0000313|EMBL:KAF7080802.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7080802.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS6A02G340600.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS6A02G340600.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS6A02G340600.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7080802.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7080802.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022226; KAF7080802.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6NW41; -.
DR SMR; A0A3B6NW41; -.
DR STRING; 4565.A0A3B6NW41; -.
DR PaxDb; 4565-Traes_6AL_AA5E171CD-1; -.
DR EnsemblPlants; TraesCS6A02G340600.1; TraesCS6A02G340600.1; TraesCS6A02G340600.
DR Gramene; TraesCAD_scaffold_034926_01G000600.1; TraesCAD_scaffold_034926_01G000600.1; TraesCAD_scaffold_034926_01G000600.
DR Gramene; TraesCLE_scaffold_025678_01G000100.1; TraesCLE_scaffold_025678_01G000100.1; TraesCLE_scaffold_025678_01G000100.
DR Gramene; TraesCS6A02G340600.1; TraesCS6A02G340600.1; TraesCS6A02G340600.
DR Gramene; TraesCS6A03G0877500.1; TraesCS6A03G0877500.1.CDS; TraesCS6A03G0877500.
DR Gramene; TraesPAR_scaffold_049158_01G000700.1; TraesPAR_scaffold_049158_01G000700.1; TraesPAR_scaffold_049158_01G000700.
DR Gramene; TraesROB_scaffold_051741_01G000700.1; TraesROB_scaffold_051741_01G000700.1; TraesROB_scaffold_051741_01G000700.
DR Gramene; TraesWEE_scaffold_015251_01G000700.1; TraesWEE_scaffold_015251_01G000700.1; TraesWEE_scaffold_015251_01G000700.
DR OMA; GQTNPEM; -.
DR OrthoDB; 450788at2759; -.
DR Proteomes; UP000019116; Chromosome 6A.
DR Proteomes; UP000815260; Chromosome 6A.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1370.210; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR36886; PROTEIN FRIGIDA-ESSENTIAL 1; 1.
DR PANTHER; PTHR36886:SF8; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 38; 1.
DR Pfam; PF14608; zf-CCCH_2; 1.
DR Pfam; PF18345; zf_CCCH_4; 1.
DR SMART; SM00356; ZnF_C3H1; 3.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 224..246
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 303..330
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 362..389
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 224..246
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 303..330
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 362..389
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..226
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 239..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 332..364
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 387..454
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 477..500
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 546..567
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 753..772
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 818..905
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 25..44
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..115
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 147..176
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 177..195
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 196..213
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 332..346
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..429
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 818..876
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 881..905
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 989 AA; 109107 MW; FECA0BEE4BC0FDA4 CRC64;
MAGVARKGRS KWDTQEISPD IVEISEDDSP PKNTDDRRKD VIPTQDLTND NGKRLGESSN
LKPDAFMHQG STEYEQERTD GLNKDVKERQ SKASSERSHA PRMAEEGHNN DDWGKLASLE
KATGNQAMSR NADDRRRGDG WGTAASRGYS SRVSSGPDAW KQRTRSPSPR GAWNRSRRNR
SGSRSRSRER VRGRSRSRSR SPYFDRGSDW RAERGRISGG PSLLCRDFTA GRCRRGLHCR
IPHEDGGRRQ FDEPYPADSR ERYGHQNKDF MDPREPDDYV RSRQPRGHFD EGTWERSEPR
RDYRSSDQCH EFVKGRCSRG ASCRYVHDES ASHAGWRDDA RETAHVRGGP DSSFGNRTEH
RREQKRPCKF FAEGRCRRGE TCPYLHEEAP QSQMAPGASD EPPKYSGGRT PRGNYSNWGE
ETNATHAGSH ILSRDDRENP GSQHTARSDT GYGYKNRQLE DAGRDQYQII PQEDFCSQGR
NKPEMSASKQ PQFSSPIQTS ADSMNNDKVS DMDGLSASAT TGNLNMQTGI NAANLLGGQS
LSQIAQSQDA VPQTSTAPIH PVTSQQQDGT SMFPFNIQQH ESNFSLHPNR QDQFSNFSLH
PDRQDQFVAS QATANNSAPS MQNQPVAAPY MGHGQHSYTL GSQALPAFNG HNFSGAGQVP
QDRPTPFYAG QSQATVDMSN PNQESGTHSM QNTHSFQPVA PNMQAHSQAL QGLSGVPSQD
TGTQSIQNAH NFQPVAPPYM QSRGQTLQGL SILPSSSSAD MPGAPPVPPN EEEIRRSLTS
LAATLIMQPG TVAGLQLPQP ILNPSLMASL SAVEPSQWPW AQQQQAGTTQ LARSEQQAPQ
QTLPAPSTAV GSSNGNNPAP QSVGQTAATS VVTAPQAAEN KKVEAKAKDS DGEQDGDKNK
KGNKEESKAL KMFKLALADF VKDVLKPTWK EGQLTREVHK TIVKKVVDKV TSTVENTPPT
KEKIDVYMSY SKEKLSKLVQ AYVGKYVKA
//