ID A0A3B6PNW5_WHEAT Unreviewed; 228 AA.
AC A0A3B6PNW5;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=CFC21_089233 {ECO:0000313|EMBL:KAF7085856.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS6B02G336900.1};
RN [1] {ECO:0000313|EMBL:KAF7085856.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7085856.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS6B02G336900.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS6B02G336900.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS6B02G336900.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7085856.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7085856.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022227; KAF7085856.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6PNW5; -.
DR SMR; A0A3B6PNW5; -.
DR STRING; 4565.A0A3B6PNW5; -.
DR EnsemblPlants; TraesCS6B02G336900.1; TraesCS6B02G336900.1; TraesCS6B02G336900.
DR Gramene; TraesCAD_scaffold_117496_01G000200.1; TraesCAD_scaffold_117496_01G000200.1; TraesCAD_scaffold_117496_01G000200.
DR Gramene; TraesCLE_scaffold_121586_01G000200.1; TraesCLE_scaffold_121586_01G000200.1; TraesCLE_scaffold_121586_01G000200.
DR Gramene; TraesCS6B02G336900.1; TraesCS6B02G336900.1; TraesCS6B02G336900.
DR Gramene; TraesCS6B03G0954800.1; TraesCS6B03G0954800.1.CDS; TraesCS6B03G0954800.
DR Gramene; TraesPAR_scaffold_124336_01G000200.1; TraesPAR_scaffold_124336_01G000200.1; TraesPAR_scaffold_124336_01G000200.
DR Gramene; TraesROB_scaffold_106537_01G000100.1; TraesROB_scaffold_106537_01G000100.1; TraesROB_scaffold_106537_01G000100.
DR Gramene; TraesWEE_scaffold_111204_01G000100.1; TraesWEE_scaffold_111204_01G000100.1; TraesWEE_scaffold_111204_01G000100.
DR OMA; MAHAPCA; -.
DR OrthoDB; 1214611at2759; -.
DR Proteomes; UP000019116; Chromosome 6B.
DR Proteomes; UP000815260; Chromosome 6B.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd16461; RING-H2_EL5-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044523; NIP1/2-like.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46151; NEP1-INTERACTING PROTEIN-LIKE 2; 1.
DR PANTHER; PTHR46151:SF18; NEP1-INTERACTING PROTEIN-LIKE 2; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 29..57
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 183..225
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 228 AA; 24169 MW; 47684EC91C2969E7 CRC64;
MEVAAAGEPA PAGEWLEERG VDTVYLPRLI AGVISGALTG LFALAGALTG AVTGALAGRA
SDSGVLRGAG LGAIAGAVLS IEVLEASRAY WCSDRLGTCS MADFIEQLLH ARFVQQQLGS
SAHMAYRWQL SIPDFGHDDV YDIFGDISSR GLSREALEKL PHYVVADQVQ AEAQGKSGEN
MSCAICLQDM VAGETARRLP TCSHAFHQLC VDKWLISHGS CPVCRQHV
//
