ID A0A3B6QI90_WHEAT Unreviewed; 540 AA.
AC A0A3B6QI90;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=CFC21_093095 {ECO:0000313|EMBL:KAF7090331.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS6D02G230900.1.cds1};
RN [1] {ECO:0000313|EMBL:KAF7090331.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7090331.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS6D02G230900.1.cds1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS6D02G230900.1.cds1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS6D02G230900.1.cds1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7090331.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7090331.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022228; KAF7090331.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6QI90; -.
DR STRING; 4565.A0A3B6QI90; -.
DR PaxDb; 4565-Traes_6DL_434BF5425-1; -.
DR EnsemblPlants; TraesCS6D02G230900.1; TraesCS6D02G230900.1.cds1; TraesCS6D02G230900.
DR Gramene; TraesCAD_scaffold_040612_01G000100.1; TraesCAD_scaffold_040612_01G000100.1; TraesCAD_scaffold_040612_01G000100.
DR Gramene; TraesCLE_scaffold_036108_01G000100.1; TraesCLE_scaffold_036108_01G000100.1; TraesCLE_scaffold_036108_01G000100.
DR Gramene; TraesCS6D02G230900.1; TraesCS6D02G230900.1.cds1; TraesCS6D02G230900.
DR Gramene; TraesCS6D03G0565600.1; TraesCS6D03G0565600.1.CDS1; TraesCS6D03G0565600.
DR Gramene; TraesPAR_scaffold_007144_01G000100.1; TraesPAR_scaffold_007144_01G000100.1; TraesPAR_scaffold_007144_01G000100.
DR Gramene; TraesRN6D0100600100.1; TraesRN6D0100600100.1; TraesRN6D0100600100.
DR Gramene; TraesROB_scaffold_006743_01G000400.1; TraesROB_scaffold_006743_01G000400.1; TraesROB_scaffold_006743_01G000400.
DR Gramene; TraesWEE_scaffold_033629_01G000100.1; TraesWEE_scaffold_033629_01G000100.1; TraesWEE_scaffold_033629_01G000100.
DR OMA; THQHAMA; -.
DR Proteomes; UP000019116; Chromosome 6D.
DR Proteomes; UP000815260; Chromosome 6D.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR47068; OS02G0659100 PROTEIN; 1.
DR PANTHER; PTHR47068:SF1; OS02G0659100 PROTEIN; 1.
DR Pfam; PF13912; zf-C2H2_6; 2.
DR SMART; SM00355; ZnF_C2H2; 3.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 64..91
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 236..263
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 358..380
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 26..49
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 95..120
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 175..196
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 465..507
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 465..483
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 540 AA; 56981 MW; ECB8C64B49FA9BFA CRC64;
MCGRALGGHM RAHGIADDAL AAEEAFDDDG GGVGESSEAG SPSPTTAKRM YGLRANPGRL
RNCRVCENCG KEFTSWKSLL DHGRCSFDED DDLDGSLRSS SPLHNNTDEG VDEDEEEEGD
LALASGWSKG KRSRRAKVMI TGSGAISEVQ QPAPSSEEED LANCLVMLSS SRVTQPTVHV
DADQESSASA SKDEERNRLL VPQPLSIIPP MTAQFKFSAP QVVVAQHVPT VPRGLFECKA
CKKVFTSHQA LGGHRASHKK VKGCFAAKLE SSRNETTHQH AMASAALHDN TRAIPEAVGD
TSTTEGKTGN LDAGKATSVG AGEVVVPTAT TEMAIMPIAD AAPVAAAFSP FKKKGKVHEC
SICHRVFTSG QALGGHKRCH WLTSSATDPA KLQPVVPDHL MAAMCHHLTL GRPMFDTADQ
RILDLNVPTN PSAEAIATRQ AAELNDIPLC LNAPASMYAQ SWTGHSNASH VNKTGTSSRN
DAAAAGGAAT EDEADSTSAK KAKVSDLKDM KVAGESLSWL QVGIGISSSE KNEKSTQEGA
//
