ID A0A3B6QLR4_WHEAT Unreviewed; 402 AA.
AC A0A3B6QLR4;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=CFC21_094116 {ECO:0000313|EMBL:KAF7091548.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS6D02G328700.1};
RN [1] {ECO:0000313|EMBL:KAF7091548.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7091548.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS6D02G328700.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS6D02G328700.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS6D02G328700.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7091548.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7091548.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM022228; KAF7091548.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6QLR4; -.
DR PaxDb; 4565-Traes_6DL_5772E9F01-2; -.
DR EnsemblPlants; TraesCS6D02G328700.1; TraesCS6D02G328700.1; TraesCS6D02G328700.
DR Gramene; TraesCAD_scaffold_055093_01G000200.1; TraesCAD_scaffold_055093_01G000200.1; TraesCAD_scaffold_055093_01G000200.
DR Gramene; TraesCLE_scaffold_062900_01G000200.1; TraesCLE_scaffold_062900_01G000200.1; TraesCLE_scaffold_062900_01G000200.
DR Gramene; TraesCS6D02G328700.1; TraesCS6D02G328700.1; TraesCS6D02G328700.
DR Gramene; TraesCS6D03G0766400.1; TraesCS6D03G0766400.1.CDS; TraesCS6D03G0766400.
DR Gramene; TraesPAR_scaffold_102894_01G000300.1; TraesPAR_scaffold_102894_01G000300.1; TraesPAR_scaffold_102894_01G000300.
DR Gramene; TraesROB_scaffold_048794_01G000200.1; TraesROB_scaffold_048794_01G000200.1; TraesROB_scaffold_048794_01G000200.
DR Gramene; TraesWEE_scaffold_127711_01G000200.1; TraesWEE_scaffold_127711_01G000200.1; TraesWEE_scaffold_127711_01G000200.
DR OMA; RSHWFTH; -.
DR OrthoDB; 5489840at2759; -.
DR Proteomes; UP000019116; Chromosome 6D.
DR Proteomes; UP000815260; Chromosome 6D.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46225; C3H4 TYPE ZINC FINGER PROTEIN; 1.
DR PANTHER; PTHR46225:SF19; RING-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13639; zf-RING_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 92..112
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 124..144
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 205..223
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 235..268
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 334..375
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..84
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 158..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 383..402
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 158..178
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 402 AA; 44253 MW; 2CDFA7487A14CE71 CRC64;
MQSGMEQTTG VSGHEHVIDI PRDSGPSASA SHSVGRENHE ELNPVDRPST RAATSALQPP
AAIGPPHAEN TSGTRRRDNY GRRHRSPLNS GLWISVEVIV NVSQIVAAIV VLSLSRKEHP
QAPLFEWVIG YTVGCFATLP HLYWRYIHRN IVNGENEPAH SLQGSSQNNS TEPTPASVSE
RRRNAARNAV LANPRINALF DHFKMALDCF FAVWFVVGNV WIFGGRSSAV DAPNLYRLCI
VFLTFSCIGY AMPFILCAMI CCCLPCIISV MGFREDTNNT RGATSESINT LPTYKFKTKK
RRHGSGNEAE GQEGGIVAAG TDKERSLSAE DAVCCICLAK YAHNEELREL PCTHCFHKEC
VDKWLKINAL CPLCKAEIAS SSGTSDTRHI DHTVPTQEIE MH
//
