ID A0A3B6SHP7_WHEAT Unreviewed; 772 AA.
AC A0A3B6SHP7;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=CFC21_102496 {ECO:0000313|EMBL:KAF7101100.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS7B02G147500.1};
RN [1] {ECO:0000313|EMBL:KAF7101100.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7101100.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS7B02G147500.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS7B02G147500.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS7B02G147500.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7101100.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7101100.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
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DR EMBL; CM022230; KAF7101100.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6SHP7; -.
DR SMR; A0A3B6SHP7; -.
DR STRING; 4565.A0A3B6SHP7; -.
DR EnsemblPlants; TraesCS7B02G147500.1; TraesCS7B02G147500.1; TraesCS7B02G147500.
DR Gramene; TraesCS7B02G147500.1; TraesCS7B02G147500.1; TraesCS7B02G147500.
DR Gramene; TraesCS7B03G0401300.1; TraesCS7B03G0401300.1.CDS; TraesCS7B03G0401300.
DR Gramene; TraesROB_scaffold_000152_01G000300.1; TraesROB_scaffold_000152_01G000300.1; TraesROB_scaffold_000152_01G000300.
DR Gramene; TraesWEE_scaffold_000278_01G000100.1; TraesWEE_scaffold_000278_01G000100.1; TraesWEE_scaffold_000278_01G000100.
DR OMA; AIVMDSE; -.
DR OrthoDB; 390797at2759; -.
DR Proteomes; UP000019116; Chromosome 7B.
DR Proteomes; UP000815260; Chromosome 7B.
DR GO; GO:0008889; F:glycerophosphodiester phosphodiesterase activity; IBA:GO_Central.
DR GO; GO:0006071; P:glycerol metabolic process; IEA:UniProtKB-KW.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR CDD; cd08603; GDPD_SHV3_repeat_1; 1.
DR CDD; cd08604; GDPD_SHV3_repeat_2; 1.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 2.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF6; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 2.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 2.
DR PROSITE; PS51704; GP_PDE; 2.
PE 4: Predicted;
KW Glycerol metabolism {ECO:0000256|ARBA:ARBA00022798};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..35
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 36..772
FT /note="glycerophosphodiester phosphodiesterase"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5040072680"
FT DOMAIN 52..354
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT DOMAIN 370..673
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
FT REGION 704..751
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 727..745
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 772 AA; 83838 MW; A2BAD738EFBAD736 CRC64;
MRSGRVPGRG GGDGRGGETA ALLCGLLLLL GAADAQGIRR PSSYKTLRGD APLVIAKGGF
SGVFPDSSYG AFSFALLASA PDTSLWCDVQ LTKDGVGICL RDINMSNCTN AAQVYPAKNK
KEAKYVIDGV PKTGYFSLDF TLSEIQTTIS LTQGIYSRTE RFDTMYYILS VTDFQSNVKP
PSVWLNVQRD IFYKQHGLNM RSYIVSILKS VPVKYISSPE LGFLKSISKR VGGRTKLVFR
FPDNFLSDPS TNQTYSSLSK NLTFIKTIAS GIMVPKTYIW PVTNDNYLEP PTSFVQDAHS
AGLEIYASDF ANDRIIPYNY SYDPLQEYLS FISDGGFSVD GVLTDYPITA SEAIGCFADL
NASKADHGKP LIISHNGASG DYPDCTDLAY QNAIKDGADV IDCVLQVTKD RVLICMSSIN
LLETTNVQMT PFSSRTSVIP EVRGTPGIFT FNLTWNDISD SSLKPKISSP LSTYYLVRNP
RYTNNGKFVK FSDFLEFGKD QDLSGIMIII ENAAFMAKSL GFDVLESLTT ALNDAGYNNQ
TTKEVMIQST DSAVLVKLKQ QKAKYKLVYT LPSGIGSASV SSLTDVKEFA EAVVVDRSSF
FAQSVHFIIN HTSLLTDLQS AGLTVYAQVF RNEFVSQPWD FFGDETVEIN SYAQSLKVDG
LITDFPKTVR RYKRNSCTGL GNDVPSYMGN VTVGGLAQLL KNQAAPQAQP PSVAPMPKLD
ASSVQQPPFP PVAPKNAPFG AGPPPGSSPS AAHKTAVSTC ILLVVACATL LL
//
