ID A0A3B6TIT6_WHEAT Unreviewed; 1164 AA.
AC A0A3B6TIT6;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=USP domain-containing protein {ECO:0000259|PROSITE:PS50235};
GN ORFNames=CFC21_109016 {ECO:0000313|EMBL:KAF7108569.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS7D02G259000.1};
RN [1] {ECO:0000313|EMBL:KAF7108569.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7108569.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS7D02G259000.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS7D02G259000.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS7D02G259000.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7108569.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7108569.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the peptidase C19 family.
CC {ECO:0000256|ARBA:ARBA00009085}.
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DR EMBL; CM022231; KAF7108569.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6TIT6; -.
DR STRING; 4565.A0A3B6TIT6; -.
DR PaxDb; 4565-Traes_7DS_381B5358F-2; -.
DR EnsemblPlants; TraesCS7D02G259000.1; TraesCS7D02G259000.1; TraesCS7D02G259000.
DR Gramene; TraesCAD_scaffold_112394_01G000100.1; TraesCAD_scaffold_112394_01G000100.1; TraesCAD_scaffold_112394_01G000100.
DR Gramene; TraesCLE_scaffold_114909_01G000100.1; TraesCLE_scaffold_114909_01G000100.1; TraesCLE_scaffold_114909_01G000100.
DR Gramene; TraesCS7D02G259000.1; TraesCS7D02G259000.1; TraesCS7D02G259000.
DR Gramene; TraesCS7D03G0585700.1; TraesCS7D03G0585700.1.CDS; TraesCS7D03G0585700.
DR Gramene; TraesROB_scaffold_105174_01G000100.1; TraesROB_scaffold_105174_01G000100.1; TraesROB_scaffold_105174_01G000100.
DR Gramene; TraesWEE_scaffold_006841_01G000500.1; TraesWEE_scaffold_006841_01G000500.1; TraesWEE_scaffold_006841_01G000500.
DR OMA; ANRIDEK; -.
DR OrthoDB; 227085at2759; -.
DR Proteomes; UP000019116; Chromosome 7D.
DR Proteomes; UP000815260; Chromosome 7D.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0004843; F:cysteine-type deubiquitinase activity; IBA:GO_Central.
DR Gene3D; 3.90.70.10; Cysteine proteinases; 2.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR001394; Peptidase_C19_UCH.
DR InterPro; IPR018200; USP_CS.
DR InterPro; IPR028889; USP_dom.
DR PANTHER; PTHR24006; UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; 1.
DR PANTHER; PTHR24006:SF807; USP DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00443; UCH; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF57850; RING/U-box; 2.
DR PROSITE; PS00972; USP_1; 1.
DR PROSITE; PS00973; USP_2; 1.
DR PROSITE; PS50235; USP_3; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 521..1152
FT /note="USP"
FT /evidence="ECO:0000259|PROSITE:PS50235"
FT REGION 1..51
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 71..91
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 105..131
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 678..702
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 871..936
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 948..1016
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 18..32
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 105..130
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 878..894
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 908..932
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 949..1012
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1164 AA; 128229 MW; A79CF07BD10EC285 CRC64;
MAASAPRPAH QTSPGATVPR PAKPPPSLSP PRCPRRCSAR SSSLAASPPT PLLRSVLFPR
RLLTAGVMVE EKRERAEEAS ESPQKSPRLD PLAAACPGCS AASASPTGWS EWPSSEEAEA
ATSSDSTVDS MDDSGRCDHI LFDLDMIVHE LKVANQVLKE PWKCQRRNCN TTWKGASEDD
QGMMKCIDCA YFFCSGWPVD IENPQGHARW HAGEHQHWVA QWCDEPNLGY CFLCARPMRL
SDWSEDDYAV AARNEKDQQM PGDSAAKDGW GTMAGVVKDD WGTMASIAKE GCETGAENPQ
NPPPMDLLLL ASAAENMQKY PHLDLPASEA LVLSSESPST GEAEETSDCT YDIGSCEHLF
KDREELDDMV RDIKTAEKPP ECEHFPCTTT CTWRGAAAGL MVCTECTSTF CTGENGDMEN
PQGHARWHAT RDYHWVALWY NEPYKGYCFE CGHVLKLGQD KLSDDEWAAV ARNKRDERAM
SASNGWDEWG TAAKSYTKDL WAIVTGDDAS GYSNGNGCVI RGLPNLGNTC YMNALLQCLL
ALGELRTRIL GPGARLGRIG LHLKQLFVET SSTNDARRAL DPEMLLKDMR VFNPQFKGSL
MQDSQEFLAS LRSALEEETK DLNKLHGGSE FHAIGNSIFG GWLRQTLYCI SCPTKSVLGL
QFDELQLALP SKDCPARSVT LPPMTRSRGS PTKSRKELFQ QTDKTDGEKI QTIAEGGDSQ
FPGSEFGNEA IEKTPKPLQV DSTEVEDVAH GRLQTQKNDV PREIIEVPIK VLDFIPNLFD
DTERMDESIV DPHGPEDTGP PPLVDIEAKE NTYSVEFTTE DKGRAQSSDI TDDEAVHMNS
VASLEDCLTL LCYCPVGWKC DNCSKVVELP RKNGSENGEP MIASTNVNPT VEGDQTELSD
RKTCPSERSN DLNSLSVHYT SPSRQTHGSD AHHQVILSED RISEEITSGM SYDEKNSASC
STTNKKSESH EIVQEAAPSS FPTDKQTDLL SAQDSQDTSD QNLGSGKQVK LDDHSVQQVE
ENRIEQKYET GGFQIQLITK LPPVLTIQLK RFTNALSKVR GHVSFKEILH AGPFMDPSSE
DKGNSSYRLV GVIEHRGHAL STGHYVAYVR AGRKQQSSGS SSWVCASDRD IKEVPLEEVL
GCEAYMLFYE RMDDRGISGS LATN
//
