ID A0A3B6TJX8_WHEAT Unreviewed; 297 AA.
AC A0A3B6TJX8;
DT 05-DEC-2018, integrated into UniProtKB/TrEMBL.
DT 05-DEC-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN ORFNames=CFC21_107158 {ECO:0000313|EMBL:KAF7106428.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS7D02G078800.1};
RN [1] {ECO:0000313|EMBL:KAF7106428.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7106428.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS7D02G078800.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS7D02G078800.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS7D02G078800.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7106428.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7106428.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the HD-ZIP homeobox family. Class II subfamily.
CC {ECO:0000256|ARBA:ARBA00006074}.
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DR EMBL; CM022231; KAF7106428.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A3B6TJX8; -.
DR SMR; A0A3B6TJX8; -.
DR EnsemblPlants; TraesCS7D02G078800.1; TraesCS7D02G078800.1; TraesCS7D02G078800.
DR Gramene; TraesCAD_scaffold_100229_01G000100.1; TraesCAD_scaffold_100229_01G000100.1; TraesCAD_scaffold_100229_01G000100.
DR Gramene; TraesCLE_scaffold_046183_01G000400.1; TraesCLE_scaffold_046183_01G000400.1; TraesCLE_scaffold_046183_01G000400.
DR Gramene; TraesCS7D02G078800.1; TraesCS7D02G078800.1; TraesCS7D02G078800.
DR Gramene; TraesCS7D03G0180300.1; TraesCS7D03G0180300.1.CDS; TraesCS7D03G0180300.
DR Gramene; TraesKAR7D01G0036510.1; cds.TraesKAR7D01G0036510.1; TraesKAR7D01G0036510.
DR Gramene; TraesPAR_scaffold_081053_01G000100.1; TraesPAR_scaffold_081053_01G000100.1; TraesPAR_scaffold_081053_01G000100.
DR Gramene; TraesROB_scaffold_047520_01G000100.1; TraesROB_scaffold_047520_01G000100.1; TraesROB_scaffold_047520_01G000100.
DR Gramene; TraesWEE_scaffold_047055_01G000100.1; TraesWEE_scaffold_047055_01G000100.1; TraesWEE_scaffold_047055_01G000100.
DR OMA; RSHCADR; -.
DR OrthoDB; 415298at2759; -.
DR Proteomes; UP000019116; Chromosome 7D.
DR Proteomes; UP000815260; Chromosome 7D.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR000047; HTH_motif.
DR InterPro; IPR003106; Leu_zip_homeo.
DR PANTHER; PTHR45714; HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14; 1.
DR PANTHER; PTHR45714:SF7; HOMEOBOX-LEUCINE ZIPPER PROTEIN HOX2; 1.
DR Pfam; PF02183; HALZ; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR PRINTS; PR00031; HTHREPRESSR.
DR SMART; SM00340; HALZ; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000019116};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..18
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 19..297
FT /note="Homeobox domain-containing protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5039995521"
FT DOMAIN 112..172
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 114..173
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 58..119
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 181..208
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 297 AA; 31584 MW; 338AF5C25C89D862 CRC64;
MHRAAGLDLG LGLGLGLASQ GSLTSSTTTA SSSPASHWTA ALSSVVGAQE SYGLHQYAGQ
PRKEEPGMRT STSPESGVSA GTKRGLERTG SGVSRGGAAT AGSDEDDDGG DGAGGRKKLR
LSKDQAAVLE ECFKTHSTLN PKQKTALANR LGLRPRQVEV WFQNRRARTK LKQTEVDCEY
MKRWCEQLAE QNKRLEKEVA ELRALKAAPA QQASPAATLT MCPSCRRVAA AGPSATQHQH
QQLQQCHPKP HAQPAGNVLP SHCQFFPSTT AAAPDRSGRL QGAWNGAAQP LVTRELF
//
