ID   A0A3D8MTL0_9DELT        Unreviewed;       813 AA.
AC   A0A3D8MTL0;
DT   16-JAN-2019, integrated into UniProtKB/TrEMBL.
DT   16-JAN-2019, sequence version 1.
DT   24-JAN-2024, entry version 20.
DE   RecName: Full=Murein L,D-transpeptidase {ECO:0008006|Google:ProtNLM};
GN   ORFNames=DV096_14060 {ECO:0000313|EMBL:RDV37624.1};
OS   Bradymonadaceae bacterium TMQ3.
OC   Bacteria; Deltaproteobacteria; Bradymonadales; Bradymonadaceae.
OX   NCBI_TaxID=2283320 {ECO:0000313|EMBL:RDV37624.1, ECO:0000313|Proteomes:UP000256871};
RN   [1] {ECO:0000313|EMBL:RDV37624.1, ECO:0000313|Proteomes:UP000256871}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=TMQ3 {ECO:0000313|EMBL:RDV37624.1,
RC   ECO:0000313|Proteomes:UP000256871};
RA   Wang S.;
RT   "Lujinxingia celare sp. nov., isolated from a marine island.";
RL   Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC       {ECO:0000256|ARBA:ARBA00004752}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:RDV37624.1}.
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DR   EMBL; QRGZ01000005; RDV37624.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A3D8MTL0; -.
DR   OrthoDB; 9778545at2; -.
DR   UniPathway; UPA00219; -.
DR   Proteomes; UP000256871; Unassembled WGS sequence.
DR   GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR   GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR   CDD; cd16913; YkuD_like; 2.
DR   Gene3D; 1.10.101.10; PGBD-like superfamily/PGBD; 1.
DR   InterPro; IPR005490; LD_TPept_cat_dom.
DR   InterPro; IPR045380; LD_TPept_scaffold_dom.
DR   InterPro; IPR002477; Peptidoglycan-bd-like.
DR   InterPro; IPR036365; PGBD-like_sf.
DR   InterPro; IPR036366; PGBDSf.
DR   InterPro; IPR038063; Transpep_catalytic_dom.
DR   PANTHER; PTHR41533:SF2; BLR7131 PROTEIN; 1.
DR   PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR   Pfam; PF01471; PG_binding_1; 1.
DR   Pfam; PF20142; Scaffold; 1.
DR   Pfam; PF03734; YkuD; 2.
DR   SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
DR   SUPFAM; SSF47090; PGBD-like; 1.
PE   4: Predicted;
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   SIGNAL          1..29
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           30..813
FT                   /note="Murein L,D-transpeptidase"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5017607801"
FT   DOMAIN          91..156
FT                   /note="L,D-transpeptidase scaffold"
FT                   /evidence="ECO:0000259|Pfam:PF20142"
FT   DOMAIN          368..418
FT                   /note="Peptidoglycan binding-like"
FT                   /evidence="ECO:0000259|Pfam:PF01471"
FT   DOMAIN          456..537
FT                   /note="L,D-transpeptidase catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF03734"
FT   DOMAIN          675..755
FT                   /note="L,D-transpeptidase catalytic"
FT                   /evidence="ECO:0000259|Pfam:PF03734"
FT   REGION          571..618
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   813 AA;  91310 MW;  2C35078B4F9B1234 CRC64;
     MIFNTPHRAS HSLRLLAMGL LTSSLLAFSA CSEPTIEPAA AQSYAAQWAP TLEDALREKS
     ASAAASQALK AAFEKGDEVR QASGEPPFAT LVNQLYRERE YEPALVKNAT LTPAGEALWN
     ALQVIEDHQL DAAPYRLDEL ARLFEELEAK KQAYADFEGL QPTEAEIAAA TAWLTEQPVS
     TFALSDDSRP QLTEALLNAP EGQRLNEALK AYETKSADVI AIEARLERLL AMGLARYARE
     LRYFRLKEIF VHERHWDEYN EPDSRSTRPD AAKGPFRAGQ VWRQASHVAT EMANRRKEEI
     FHRGIQQTLS DLLDAKAPQE AQAVIDRVPP QNPQYMGLIN AYRRYRDIVE AGGWQEVPTP
     RSLKPGQRSE AVTHLKQRLR IEGFYPENAP IDDHYDEALE EAVREYQHTH QMVANGKPHN
     VFWGSLNVPA QRRLAQIALN IKRWRSTNTR HAEDDQYVFV NIPDFNVELW KAQELKLRFG
     IVVGNNNKEV NPLTGEAERA NRTPTLAAYI DRIIYNPYWN VTPRIRAESI IPKVHNHITD
     AYVSRLSGLL ASAKPTPAPG ALRAPQAPTL TANRAPGMIG GPPAAAQPAA PSSAQPAAQP
     TVPAAPVTAP DPAESLTTMR STDTGRVRAF KTEPLRRILE HHFPGEEGLA RFKAQFPYLD
     PHTGMVDVST TNPDHIPSWY EANGYEVAFP GRTWEYVRML PGGENALGFV KIIFPNLQDI
     YLHDTPHKPL FSRPVRGFSH GCIRMEQPLN MAETLLQLDG QNPDIDRILE KGDYNPIFLK
     HQVPVFIEYY TVRVDDEGRP HFLADIYNYD EES
//